RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ZNF827Q17R98 1081 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 SPDYE1Q8NFV5 336 aaPredicted RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 CXorf38Q8TB03 319 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 ZMAT2Q96NC0 199 aaKnown RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 TAF1DQ9H5J8 278 aaPredicted RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 STXBP3O00186 592 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 CYP4F22Q6NT55 531 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 ARHGAP27Q6ZUM4 889 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 APLFQ8IW19 511 aaPredicted RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 CMTR1Q8N1G2 835 aaKnown RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 HEXIM2Q96MH2 286 aaKnown RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 GPBP1L1Q9HC44 474 aaPredicted RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 SNX2O60749 519 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 KRT4P19013 534 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 CYP2C19P33261 490 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 CDK8P49336 464 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 TEX2Q8IWB9 1127 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 ADAM22Q9P0K1 906 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 TSPY1Q01534 308 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 NUDT18Q6ZVK8 323 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 ATP11CQ8NB49 1132 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 HERC5Q9UII4 1024 aaKnown RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 CLTCL1P53675 1640 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 RECQLP46063 649 aaPredicted RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 ABCE1P61221 599 aaKnown RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 RIBC1Q8N443 379 aaPredicted RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 RAB42Q8N4Z0 105 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 URGCPQ8TCY9 931 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 FAF2Q96CS3 445 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 TUFT1Q9NNX1 390 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 NDUFB9Q9Y6M9 179 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 SOX5P35711 763 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 IFNAR2P48551 515 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 KCTD1Q719H9 257 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 RNF169Q8NCN4 708 aa9.44□□□□□ -0.9
LSAMP-205ENST00000490035 TPX2Q9ULW0 747 aaKnown RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 FARP1Q9Y4F1 1045 aaPredicted RBP9.44□□□□□ -0.9
LSAMP-205ENST00000490035 C2orf54Q08AI8 447 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 ILF2Q12905 390 aaKnown RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 KNOP1Q1ED39 458 aaKnown RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 ADAT2Q7Z6V5 191 aaKnown RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 TRIML2Q8N7C3 387 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 STAMBPL1Q96FJ0 436 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 PARVAQ9NVD7 372 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 ABCA9Q8IUA7 1624 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 ERBB3P21860 1342 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 GMNCA6NCL1 334 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 APOA4P06727 396 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 MMEP08473 750 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 NNMTP40261 264 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 PAWRQ96IZ0 340 aaKnown RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 SMG5Q9UPR3 1016 aaKnown RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 SNX5Q9Y5X3 404 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 MOCS3O95396 460 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 NCF2P19878 526 aaPredicted RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 MTMR1Q13613 665 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 ADCK5Q3MIX3 580 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 EAPPQ56P03 285 aaPredicted RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 CDKL3Q8IVW4 592 aaPredicted RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 GTF3C2Q8WUA4 911 aaPredicted RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 WDR35Q9P2L0 1181 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 SOWAHDA6NJG2 315 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 RASA4BC9J798 803 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 RASA4O43374 803 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 SPAG6O75602 509 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 KCNA4P22459 653 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 AARSP49588 968 aaKnown RBP eCLIP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 RARS2Q5T160 578 aaKnown RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 RHOT1Q8IXI2 618 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 EDC3Q96F86 508 aaKnown RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 MRPL4Q9BYD3 311 aaKnown RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 NSMCE4AQ9NXX6 385 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 MAN1A2O60476 641 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 ADORA1P30542 326 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 GRIN1Q05586 938 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 PDIA5Q14554 519 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 PRUNE1Q86TP1 453 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 SNF8Q96H20 258 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 FRMD8Q9BZ67 464 aaPredicted RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 ANAPC7Q9UJX3 599 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 CLCN6P51797 869 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 MASTLQ96GX5 879 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 CHCHD3Q9NX63 227 aaKnown RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 STX18Q9P2W9 335 aaKnown RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 SYCE1LA8MT33 242 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 FGGP02679 453 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 STAT4Q14765 748 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 ZNF699Q32M78 642 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 RNF219Q5W0B1 726 aaPredicted RBP9.43□□□□□ -0.9
LSAMP-205ENST00000490035 UTYO14607 1347 aa9.43□□□□□ -0.9
LSAMP-205ENST00000490035 SPDYE2BA6NHP3 402 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 HUS1O60921 280 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 MYO1DO94832 1006 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 SPDYE6P0CI01 402 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 CASP2P42575 452 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 EFNA5P52803 228 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 KRT33BQ14525 404 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 KIF19Q2TAC6 998 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms