RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 TRPV1Q8NER1 839 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 DPH2Q9BQC3 489 aaPredicted RBP7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 KRTAP4-8Q9BYQ9 185 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 CRNKL1Q9BZJ0 848 aaKnown RBP7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 RPAP3Q9H6T3 665 aaPredicted RBP7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 HOXC10Q9NYD6 342 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 ZBED9Q6R2W3 1325 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 ZNF532Q9HCE3 1301 aa7.67□□□□□ -1.18
PRPF40A-210ENST00000489741 PAX4O43316 350 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 RAB11FIP3O75154 756 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 CYP2D6P10635 497 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 SYN1P17600 705 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 ATP5JP18859 108 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 SNAP47Q5SQN1 464 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 MFSD14CQ5VZR4 134 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 OLFML2BQ68BL8 750 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 ZNF746Q6NUN9 644 aaPredicted RBP7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 CCAR1Q8IX12 1150 aaKnown RBP7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 LCORLQ8N3X6 602 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 SHCBP1Q8NEM2 672 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 SDR42E1Q8WUS8 393 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 LPAR1Q92633 364 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 FEZ1Q99689 392 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 MOV10L1Q9BXT6 1211 aaKnown RBP7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 ATP8A2Q9NTI2 1148 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 MCM9Q9NXL9 1143 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 DDX20Q9UHI6 824 aaKnown RBP7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 ADAMTS5Q9UNA0 930 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 TMX2Q9Y320 296 aa7.66□□□□□ -1.18
PRPF40A-210ENST00000489741 UNC80Q8N2C7 3258 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 MINDY4BA8MYZ0 360 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 SMIM22K7EJ46 135 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 GOLIM4O00461 696 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 PRKAB2O43741 272 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 MSCO60682 206 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 CHGBP05060 677 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 IFIT2P09913 472 aaKnown RBP7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 CD8BP10966 210 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 CYBAP13498 195 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 VCANP13611 3396 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 CYP2C19P33261 490 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 ADD2P35612 726 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 FAM160A1Q05DH4 1040 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 UBE3CQ15386 1083 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 C12orf60Q5U649 245 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 TMEM179Q6ZVK1 233 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 SPACA3Q8IXA5 215 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 MRPL41Q8IXM3 137 aaKnown RBP7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 TDHQ8IZJ6 230 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 ABRAQ8N0Z2 381 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 MB21D1Q8N884 522 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 SLC44A5Q8NCS7 719 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 DYNLL2Q96FJ2 89 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 TMEM87BQ96K49 555 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 RHOVQ96L33 236 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 CCDC17Q96LX7 622 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 HAUS7Q99871 368 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 RSRP1Q9BUV0 290 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 SPATC1LQ9H0A9 340 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 TNKS2Q9H2K2 1166 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 VCPKMTQ9H867 229 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 PAG1Q9NWQ8 432 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 MTMR10Q9NXD2 777 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 TJP2Q9UDY2 1190 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 SWAP70Q9UH65 585 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 DDX19BQ9UMR2 479 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 SNX11Q9Y5W9 270 aa7.65□□□□□ -1.18
PRPF40A-210ENST00000489741 MAST2Q6P0Q8 1798 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 HMMRO75330 724 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 CILPO75339 1184 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 F13A1P00488 732 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 AKR1B1P15121 316 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 ADORA2AP29274 412 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 SFRP5Q5T4F7 317 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 C16orf86Q6ZW13 317 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 WFDC3Q8IUB2 231 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 MFSD4AQ8N468 514 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 GATAD2BQ8WXI9 593 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 DNAJC2Q99543 621 aaKnown RBP7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 SENP6Q9GZR1 1112 aaPredicted RBP7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 BOLA2Q9H3K6 86 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 MROH8Q9H579 483 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 ARMT1Q9H993 441 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 KBTBD4Q9NVX7 518 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 ADAM30Q9UKF2 790 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 FOCADQ5VW36 1801 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 ATAD5Q96QE3 1844 aa7.64□□□□□ -1.19
PRPF40A-210ENST00000489741 ALPK3Q96L96 1907 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 CYP2D7A0A087X1C5 515 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 DNM1LO00429 736 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 MPHOSPH10O00566 681 aaKnown RBP7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 SEPT4O43236 478 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 MBD4O95243 580 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 PLCG1P19174 1290 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 FUT4P22083 530 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 CLCN7P51798 805 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 IKZF1Q13422 519 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 TMEM132BQ14DG7 1078 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 SNX17Q15036 470 aa7.63□□□□□ -1.19
PRPF40A-210ENST00000489741 NKPD1Q17RQ9 610 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms