RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 INO80BQ9C086 356 aaPredicted RBP19.96■□□□□ 0.79
ABCF3-217ENST00000489719 KIF3AQ9Y496 699 aa19.96■□□□□ 0.79
ABCF3-217ENST00000489719 CHD7Q9P2D1 2997 aa19.95■□□□□ 0.78
ABCF3-217ENST00000489719 A0A0C4DFX4 3053 aa19.95■□□□□ 0.78
ABCF3-217ENST00000489719 SLITRK3O94933 977 aa19.95■□□□□ 0.78
ABCF3-217ENST00000489719 POLGP54098 1239 aaPredicted RBP19.95■□□□□ 0.78
ABCF3-217ENST00000489719 FAM189BP81408 668 aa19.95■□□□□ 0.78
ABCF3-217ENST00000489719 SPIRE1Q08AE8 756 aa19.95■□□□□ 0.78
ABCF3-217ENST00000489719 AAK1Q2M2I8 961 aa19.95■□□□□ 0.78
ABCF3-217ENST00000489719 PAN2Q504Q3 1202 aaKnown RBP19.95■□□□□ 0.78
ABCF3-217ENST00000489719 XKR9Q5GH70 373 aa19.95■□□□□ 0.78
ABCF3-217ENST00000489719 TJAP1Q5JTD0 557 aa19.95■□□□□ 0.78
ABCF3-217ENST00000489719 RHPN2Q8IUC4 686 aa19.95■□□□□ 0.78
ABCF3-217ENST00000489719 ATP6V0A4Q9HBG4 840 aa19.95■□□□□ 0.78
ABCF3-217ENST00000489719 C9IYK1 514 aa19.94■□□□□ 0.78
ABCF3-217ENST00000489719 RFC5P40937 340 aa19.94■□□□□ 0.78
ABCF3-217ENST00000489719 MCM2P49736 904 aa19.94■□□□□ 0.78
ABCF3-217ENST00000489719 DSC3Q14574 896 aa19.94■□□□□ 0.78
ABCF3-217ENST00000489719 ZNF174Q15697 407 aa19.94■□□□□ 0.78
ABCF3-217ENST00000489719 ZNF579Q8NAF0 562 aaKnown RBP19.94■□□□□ 0.78
ABCF3-217ENST00000489719 NEK9Q8TD19 979 aa19.94■□□□□ 0.78
ABCF3-217ENST00000489719 CLP1Q92989 425 aaKnown RBP19.94■□□□□ 0.78
ABCF3-217ENST00000489719 MRPL38Q96DV4 380 aaKnown RBP19.94■□□□□ 0.78
ABCF3-217ENST00000489719 ASB2Q96Q27 587 aa19.94■□□□□ 0.78
ABCF3-217ENST00000489719 HSD17B14Q9BPX1 270 aa19.94■□□□□ 0.78
ABCF3-217ENST00000489719 C11orf84Q9BUA3 381 aaPredicted RBP19.94■□□□□ 0.78
ABCF3-217ENST00000489719 COL25A1Q9BXS0 654 aaPredicted RBP19.94■□□□□ 0.78
ABCF3-217ENST00000489719 RC3H2Q9HBD1 1191 aaKnown RBP19.94■□□□□ 0.78
ABCF3-217ENST00000489719 WRAP73Q9P2S5 460 aaPredicted RBP19.94■□□□□ 0.78
ABCF3-217ENST00000489719 NOL7Q9UMY1 257 aaKnown RBP19.94■□□□□ 0.78
ABCF3-217ENST00000489719 COG5Q9UP83 839 aa19.94■□□□□ 0.78
ABCF3-217ENST00000489719 A0A087WZ62 844 aa19.93■□□□□ 0.78
ABCF3-217ENST00000489719 WNT7AO00755 349 aa19.93■□□□□ 0.78
ABCF3-217ENST00000489719 ZNF410Q86VK4 478 aa19.93■□□□□ 0.78
ABCF3-217ENST00000489719 NOSTRINQ8IVI9 506 aa19.93■□□□□ 0.78
ABCF3-217ENST00000489719 TCP11Q8WWU5 503 aa19.93■□□□□ 0.78
ABCF3-217ENST00000489719 HLA-CQ95604 372 aa19.93■□□□□ 0.78
ABCF3-217ENST00000489719 TMX3Q96JJ7 454 aa19.93■□□□□ 0.78
ABCF3-217ENST00000489719 FDXACB1Q9BRP7 624 aaPredicted RBP19.93■□□□□ 0.78
ABCF3-217ENST00000489719 PLVAPQ9BX97 442 aa19.93■□□□□ 0.78
ABCF3-217ENST00000489719 TMEM60Q9H2L4 133 aa19.93■□□□□ 0.78
ABCF3-217ENST00000489719 ELAC1Q9H777 363 aaKnown RBP19.93■□□□□ 0.78
ABCF3-217ENST00000489719 TMEM161AQ9NX61 479 aa19.93■□□□□ 0.78
ABCF3-217ENST00000489719 MICAL3Q7RTP6 2002 aa19.93■□□□□ 0.78
ABCF3-217ENST00000489719 C5orf67F2Z3F1 127 aa19.92■□□□□ 0.78
ABCF3-217ENST00000489719 CSDE1O75534 798 aaKnown RBP19.92■□□□□ 0.78
ABCF3-217ENST00000489719 FGFR4P22455 802 aa19.92■□□□□ 0.78
ABCF3-217ENST00000489719 ORC2Q13416 577 aaPredicted RBP19.92■□□□□ 0.78
ABCF3-217ENST00000489719 SPOUT1Q5T280 376 aaKnown RBP19.92■□□□□ 0.78
ABCF3-217ENST00000489719 FAM102BQ5T8I3 360 aa19.92■□□□□ 0.78
ABCF3-217ENST00000489719 PSPC1Q8WXF1 523 aaKnown RBP19.92■□□□□ 0.78
ABCF3-217ENST00000489719 TMEM143Q96AN5 459 aa19.92■□□□□ 0.78
ABCF3-217ENST00000489719 NLRP4Q96MN2 994 aa19.92■□□□□ 0.78
ABCF3-217ENST00000489719 CCDC43Q96MW1 224 aaKnown RBP19.92■□□□□ 0.78
ABCF3-217ENST00000489719 DHX33Q9H6R0 707 aaKnown RBP19.92■□□□□ 0.78
ABCF3-217ENST00000489719 DACT1Q9NYF0 836 aa19.92■□□□□ 0.78
ABCF3-217ENST00000489719 MRPL42Q9Y6G3 142 aaKnown RBP19.92■□□□□ 0.78
ABCF3-217ENST00000489719 PTPRSQ13332 1948 aa19.92■□□□□ 0.78
ABCF3-217ENST00000489719 MYH9P35579 1960 aaKnown RBP19.92■□□□□ 0.78
ABCF3-217ENST00000489719 TBKBP1A7MCY6 615 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 ZBTB39O15060 712 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 ASAP2O43150 1006 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 GAS2O43903 313 aaKnown RBP19.91■□□□□ 0.78
ABCF3-217ENST00000489719 LYPLA2O95372 231 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 SFPQP23246 707 aaKnown RBP eCLIP19.91■□□□□ 0.78
ABCF3-217ENST00000489719 TECP42680 631 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 TRAPPC10P48553 1259 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 GATMP50440 423 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 NAALADL2Q58DX5 795 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 TTC38Q5R3I4 469 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 KSR1Q8IVT5 923 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 PRPF31Q8WWY3 499 aaKnown RBP19.91■□□□□ 0.78
ABCF3-217ENST00000489719 TBC1D32Q96NH3 1257 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 CHST12Q9NRB3 414 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 AAASQ9NRG9 546 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 ANKEF1Q9NU02 776 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 COL4A3BPQ9Y5P4 624 aa19.91■□□□□ 0.78
ABCF3-217ENST00000489719 HOXA2O43364 376 aa19.9■□□□□ 0.78
ABCF3-217ENST00000489719 OR52Z1P0C646 297 aa19.9■□□□□ 0.78
ABCF3-217ENST00000489719 SRGAP2CP0DJJ0 459 aa19.9■□□□□ 0.78
ABCF3-217ENST00000489719 XRCC6P12956 609 aaKnown RBP eCLIP19.9■□□□□ 0.78
ABCF3-217ENST00000489719 U2AF2P26368 475 aaKnown RBP eCLIP19.9■□□□□ 0.78
ABCF3-217ENST00000489719 TIGD5Q53EQ6 642 aa19.9■□□□□ 0.78
ABCF3-217ENST00000489719 RNF169Q8NCN4 708 aa19.9■□□□□ 0.78
ABCF3-217ENST00000489719 ERMNQ8TAM6 284 aa19.9■□□□□ 0.78
ABCF3-217ENST00000489719 LMAN2LQ9H0V9 348 aa19.9■□□□□ 0.78
ABCF3-217ENST00000489719 A0A0U1RQF3 1178 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 LINC00271P0C7V0 271 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 TFF2Q03403 129 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 LAMTOR4Q0VGL1 99 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 EMC2Q15006 297 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 MCTP1Q6DN14 999 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 CATSPER4Q7RTX7 472 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 ECHDC2Q86YB7 292 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 ABI1Q8IZP0 508 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 P2RX5Q93086 422 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 MTRQ99707 1265 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 BMP2KQ9NSY1 1161 aaPredicted RBP19.89■□□□□ 0.77
ABCF3-217ENST00000489719 PLAGL2Q9UPG8 496 aa19.89■□□□□ 0.77
ABCF3-217ENST00000489719 PCDHB12Q9Y5F1 795 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms