RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 FANCLQ9NW38 375 aa15.64■□□□□ 0.09
VPS26A-205ENST00000489656 TBC1D7Q9P0N9 293 aa15.64■□□□□ 0.09
VPS26A-205ENST00000489656 IGKV6-21A0A0C4DH24 114 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 H3BRB1 525 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 ADCY3O60266 1144 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 SCP2P22307 547 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 CASP5P51878 434 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 PMS1P54277 932 aaKnown RBP15.63■□□□□ 0.09
VPS26A-205ENST00000489656 NCKAP1LP55160 1127 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 GJA9P57773 515 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 C1QTNF8P60827 252 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 CACNB2Q08289 660 aaPredicted RBP15.63■□□□□ 0.09
VPS26A-205ENST00000489656 LRRC41Q15345 812 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 FAM102BQ5T8I3 360 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 TRMT1LQ7Z2T5 733 aaKnown RBP15.63■□□□□ 0.09
VPS26A-205ENST00000489656 SLC7A3Q8WY07 619 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 ANP32BQ92688 251 aaKnown RBP15.63■□□□□ 0.09
VPS26A-205ENST00000489656 HVCN1Q96D96 273 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 JPH2Q9BR39 696 aaPredicted RBP15.63■□□□□ 0.09
VPS26A-205ENST00000489656 KCTD10Q9H3F6 313 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 SEMA6BQ9H3T3 888 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 TUT1Q9H6E5 874 aaKnown RBP15.63■□□□□ 0.09
VPS26A-205ENST00000489656 PCDHB13Q9Y5F0 798 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 PCNTO95613 3336 aa15.63■□□□□ 0.09
VPS26A-205ENST00000489656 TRIM49BA6NDI0 452 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 AP5Z1O43299 807 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 GCNT3O95395 438 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 F2P00734 622 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 ZNF286BP0CG31 522 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 MYBP10242 640 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 MARK3P27448 753 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 NMT1P30419 496 aaKnown RBP15.62■□□□□ 0.09
VPS26A-205ENST00000489656 ABCD1P33897 745 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 HOXD13P35453 343 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 ARL2P36404 184 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 TBC1D8BQ0IIM8 1120 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 ANKRD40Q6AI12 368 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 ZC3H3Q8IXZ2 948 aaKnown RBP15.62■□□□□ 0.09
VPS26A-205ENST00000489656 TSG101Q99816 390 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 DUSP9Q99956 384 aaKnown RBP15.62■□□□□ 0.09
VPS26A-205ENST00000489656 BEGAINQ9BUH8 593 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 RNPEPQ9H4A4 650 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 THAP9Q9H5L6 903 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 POLD4Q9HCU8 107 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 GPRC5CQ9NQ84 441 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 RTN4Q9NQC3 1192 aaKnown RBP15.62■□□□□ 0.09
VPS26A-205ENST00000489656 TRPC6Q9Y210 931 aa15.62■□□□□ 0.09
VPS26A-205ENST00000489656 PDXKO00764 312 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 KPNA6O60684 536 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 ELNP15502 786 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 DEKP35659 375 aaKnown RBP15.61■□□□□ 0.09
VPS26A-205ENST00000489656 SMTNP53814 917 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 GTF2BQ00403 316 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 TRIM32Q13049 653 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 DMP1Q13316 513 aaPredicted RBP15.61■□□□□ 0.09
VPS26A-205ENST00000489656 PPP2R5AQ15172 486 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 NFIL3Q16649 462 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 FSCN1Q16658 493 aaKnown RBP15.61■□□□□ 0.09
VPS26A-205ENST00000489656 TPD52L1Q16890 204 aaPredicted RBP15.61■□□□□ 0.09
VPS26A-205ENST00000489656 KNOP1Q1ED39 458 aaKnown RBP15.61■□□□□ 0.09
VPS26A-205ENST00000489656 EDRF1Q3B7T1 1238 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 MAEAQ7L5Y9 396 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 SLAIN1Q8ND83 568 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 RAET1EQ8TD07 263 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 LENG1Q96BZ8 264 aaPredicted RBP15.61■□□□□ 0.09
VPS26A-205ENST00000489656 PDLIM2Q96JY6 352 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 POLR3FQ9H1D9 316 aaPredicted RBP15.61■□□□□ 0.09
VPS26A-205ENST00000489656 SAMSN1Q9NSI8 373 aaKnown RBP15.61■□□□□ 0.09
VPS26A-205ENST00000489656 WBP1LQ9NX94 342 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 TRAF3IP3Q9Y228 551 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 ZMYM2Q9UBW7 1377 aa15.61■□□□□ 0.09
VPS26A-205ENST00000489656 H0YCG3 227 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 K7ENM7 598 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 HAS3O00219 553 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 MAGEB2O15479 319 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 PRPF6O94906 941 aaKnown RBP15.6■□□□□ 0.09
VPS26A-205ENST00000489656 FGFR1OPO95684 399 aaKnown RBP15.6■□□□□ 0.09
VPS26A-205ENST00000489656 INSRRP14616 1297 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 NPTX2P47972 431 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 PEX3P56589 373 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 SPAG1Q07617 926 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 IER5Q5VY09 327 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 CSGALNACT2Q8N6G5 542 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 TCP11Q8WWU5 503 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 BSNDQ8WZ55 320 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 KAT2BQ92831 832 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 IFT74Q96LB3 600 aa15.6■□□□□ 0.09
VPS26A-205ENST00000489656 TYW1Q9NV66 732 aaKnown RBP15.6■□□□□ 0.09
VPS26A-205ENST00000489656 RRN3P2A6NIE6 340 aa15.59■□□□□ 0.09
VPS26A-205ENST00000489656 C22orf31O95567 290 aa15.59■□□□□ 0.09
VPS26A-205ENST00000489656 ADCY5O95622 1261 aa15.59■□□□□ 0.09
VPS26A-205ENST00000489656 RARBP10826 455 aa15.59■□□□□ 0.09
VPS26A-205ENST00000489656 ATP1A3P13637 1013 aa15.59■□□□□ 0.09
VPS26A-205ENST00000489656 NAMPTP43490 491 aa15.59■□□□□ 0.09
VPS26A-205ENST00000489656 ZNF75DP51815 510 aa15.59■□□□□ 0.09
VPS26A-205ENST00000489656 SOX10P56693 466 aa15.59■□□□□ 0.09
VPS26A-205ENST00000489656 SNRPFP62306 86 aaKnown RBP15.59■□□□□ 0.09
VPS26A-205ENST00000489656 FANCCQ00597 558 aa15.59■□□□□ 0.09
VPS26A-205ENST00000489656 CCDC173Q0VFZ6 552 aa15.59■□□□□ 0.09
VPS26A-205ENST00000489656 LRRC55Q6ZSA7 311 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms