RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 AVPR2P30518 371 aa19.22■□□□□ 0.67
TOP3B-217ENST00000489581 ADD1P35611 737 aaKnown RBP19.22■□□□□ 0.67
TOP3B-217ENST00000489581 KRT17Q04695 432 aa19.22■□□□□ 0.67
TOP3B-217ENST00000489581 PFKFB3Q16875 520 aaPredicted RBP19.22■□□□□ 0.67
TOP3B-217ENST00000489581 ECHDC2Q86YB7 292 aa19.22■□□□□ 0.67
TOP3B-217ENST00000489581 SMAP1Q8IYB5 467 aaPredicted RBP19.22■□□□□ 0.67
TOP3B-217ENST00000489581 RASEFQ8IZ41 740 aa19.22■□□□□ 0.67
TOP3B-217ENST00000489581 ABI1Q8IZP0 508 aa19.22■□□□□ 0.67
TOP3B-217ENST00000489581 RNF169Q8NCN4 708 aa19.22■□□□□ 0.67
TOP3B-217ENST00000489581 ADAMTS10Q9H324 1103 aa19.22■□□□□ 0.67
TOP3B-217ENST00000489581 SPG21Q9NZD8 308 aa19.22■□□□□ 0.67
TOP3B-217ENST00000489581 SAMM50Q9Y512 469 aa19.22■□□□□ 0.67
TOP3B-217ENST00000489581 USP34Q70CQ2 3546 aa19.22■□□□□ 0.67
TOP3B-217ENST00000489581 SETQ01105 290 aaPredicted RBP19.21■□□□□ 0.67
TOP3B-217ENST00000489581 PRR16Q569H4 304 aa19.21■□□□□ 0.67
TOP3B-217ENST00000489581 LRRC43Q8N309 656 aa19.21■□□□□ 0.67
TOP3B-217ENST00000489581 MAP7D2Q96T17 732 aa19.21■□□□□ 0.67
TOP3B-217ENST00000489581 TSHZ2Q9NRE2 1034 aa19.21■□□□□ 0.67
TOP3B-217ENST00000489581 CEP131Q9UPN4 1083 aa19.21■□□□□ 0.67
TOP3B-217ENST00000489581 PDGFBP01127 241 aaPredicted RBP19.2■□□□□ 0.66
TOP3B-217ENST00000489581 HOXB8P17481 243 aaPredicted RBP19.2■□□□□ 0.66
TOP3B-217ENST00000489581 FGFR4P22455 802 aa19.2■□□□□ 0.66
TOP3B-217ENST00000489581 EIF4BP23588 611 aaKnown RBP19.2■□□□□ 0.66
TOP3B-217ENST00000489581 TMOD1P28289 359 aa19.2■□□□□ 0.66
TOP3B-217ENST00000489581 PPM1AP35813 382 aa19.2■□□□□ 0.66
TOP3B-217ENST00000489581 CLLU1OSQ5K130 101 aa19.2■□□□□ 0.66
TOP3B-217ENST00000489581 REXO1Q8N1G1 1221 aaKnown RBP19.2■□□□□ 0.66
TOP3B-217ENST00000489581 LINC01465Q8N7H1 131 aa19.2■□□□□ 0.66
TOP3B-217ENST00000489581 ZMYND12Q9H0C1 365 aa19.2■□□□□ 0.66
TOP3B-217ENST00000489581 C6orf50Q9HD87 102 aa19.2■□□□□ 0.66
TOP3B-217ENST00000489581 ZFHX2Q9C0A1 2572 aaPredicted RBP19.2■□□□□ 0.66
TOP3B-217ENST00000489581 ESYT2A0FGR8 921 aa19.19■□□□□ 0.66
TOP3B-217ENST00000489581 ZNF862O60290 1169 aa19.19■□□□□ 0.66
TOP3B-217ENST00000489581 METAP2P50579 478 aaKnown RBP eCLIP19.19■□□□□ 0.66
TOP3B-217ENST00000489581 CASP10Q92851 521 aa19.19■□□□□ 0.66
TOP3B-217ENST00000489581 FAM167AQ96KS9 214 aa19.19■□□□□ 0.66
TOP3B-217ENST00000489581 SCLT1Q96NL6 688 aa19.19■□□□□ 0.66
TOP3B-217ENST00000489581 HCFC2Q9Y5Z7 792 aa19.19■□□□□ 0.66
TOP3B-217ENST00000489581 NT5C1B-RDH14C9J2C7 533 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 CPA1P15085 419 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 CA8P35219 290 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 GPC3P51654 580 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 FGD1P98174 961 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 SMC1AQ14683 1233 aaKnown RBP19.18■□□□□ 0.66
TOP3B-217ENST00000489581 TSGA10IPQ3SY00 556 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 TPRNQ4KMQ1 711 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 SLC39A11Q8N1S5 342 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 MRPL43Q8N983 215 aaKnown RBP19.18■□□□□ 0.66
TOP3B-217ENST00000489581 KREMEN2Q8NCW0 462 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 HELQQ8TDG4 1101 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 RIPOR3Q96MK2 946 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 POMKQ9H5K3 350 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 NRBP2Q9NSY0 501 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 NR2E1Q9Y466 385 aa19.18■□□□□ 0.66
TOP3B-217ENST00000489581 A0A0U1RQF3 1178 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 C2orf71A6NGG8 1288 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 WDR64B1ANS9 1081 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 ST18O60284 1047 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 CSDE1O75534 798 aaKnown RBP19.17■□□□□ 0.66
TOP3B-217ENST00000489581 OATP04181 439 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 DARSP14868 501 aaKnown RBP19.17■□□□□ 0.66
TOP3B-217ENST00000489581 CIITAP33076 1130 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 RCAN1P53805 252 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 PRKCEQ02156 737 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 MCTP2Q6DN12 878 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 CES5AQ6NT32 575 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 ZNF598Q86UK7 904 aaKnown RBP19.17■□□□□ 0.66
TOP3B-217ENST00000489581 SKAP1Q86WV1 359 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 CCDC12Q8WUD4 166 aaPredicted RBP19.17■□□□□ 0.66
TOP3B-217ENST00000489581 ATOH1Q92858 354 aaPredicted RBP19.17■□□□□ 0.66
TOP3B-217ENST00000489581 ADAM7Q9H2U9 754 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 DISC1Q9NRI5 854 aa19.17■□□□□ 0.66
TOP3B-217ENST00000489581 RIF1Q5UIP0 2472 aaKnown RBP19.17■□□□□ 0.66
TOP3B-217ENST00000489581 CCDC196A0A1B0GTZ2 297 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 C2CD4DB7Z1M9 353 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 H0Y858 1186 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 GFRA3O60609 400 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 CLASP2O75122 1294 aaKnown RBP19.16■□□□□ 0.66
TOP3B-217ENST00000489581 CXCL14O95715 111 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 EOMESO95936 686 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 WEE2P0C1S8 567 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 GNA11P29992 359 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 KRT32Q14532 448 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 UGCGQ16739 394 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 ZNF710Q8N1W2 664 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 NLRP7Q8WX94 980 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 LENG9Q96B70 501 aa19.16■□□□□ 0.66
TOP3B-217ENST00000489581 CFAP54Q96N23 3096 aa19.15■□□□□ 0.66
TOP3B-217ENST00000489581 MSH4O15457 936 aa19.15■□□□□ 0.66
TOP3B-217ENST00000489581 PRPF3O43395 683 aaKnown RBP19.15■□□□□ 0.66
TOP3B-217ENST00000489581 CHMP2AO43633 222 aa19.15■□□□□ 0.66
TOP3B-217ENST00000489581 EDIL3O43854 480 aa19.15■□□□□ 0.66
TOP3B-217ENST00000489581 KCNA4P22459 653 aa19.15■□□□□ 0.66
TOP3B-217ENST00000489581 ALDH7A1P49419 539 aaKnown RBP19.15■□□□□ 0.66
TOP3B-217ENST00000489581 BCAR1P56945 870 aa19.15■□□□□ 0.66
TOP3B-217ENST00000489581 ITIH3Q06033 890 aa19.15■□□□□ 0.66
TOP3B-217ENST00000489581 TBC1D8BQ0IIM8 1120 aa19.15■□□□□ 0.66
TOP3B-217ENST00000489581 Q6ZUG5 572 aa19.15■□□□□ 0.66
TOP3B-217ENST00000489581 C12orf76Q8N812 135 aaPredicted RBP19.15■□□□□ 0.66
TOP3B-217ENST00000489581 PHKBQ93100 1093 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms