RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 FTHL17Q9BXU8 183 aa8.94□□□□□ -0.98
EXOSC3-206ENST00000489414 TRIM4Q9C037 500 aa8.94□□□□□ -0.98
EXOSC3-206ENST00000489414 FEM1BQ9UK73 627 aa8.94□□□□□ -0.98
EXOSC3-206ENST00000489414 EML5Q05BV3 1969 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 UPK3BL1B0FP48 263 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 UPK3BL2E5RIL1 263 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 RPP40O75818 363 aaKnown RBP8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 CXCL14O95715 111 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 CAVIN2O95810 425 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 CFBP00751 764 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 ELAVL4P26378 380 aaKnown RBP8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 CA8P35219 290 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 ARHGAP4P98171 946 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 CALD1Q05682 793 aaKnown RBP8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 BAATQ14032 418 aaPredicted RBP8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 UBAP2LQ14157 1087 aaKnown RBP8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 TAF1BQ53T94 588 aaPredicted RBP8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 FBXO47Q5MNV8 452 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 KCNT2Q6UVM3 1135 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 CYP26C1Q6V0L0 522 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 PPFIBP1Q86W92 1011 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 AGO3Q9H9G7 860 aaKnown RBP8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 LRFN2Q9ULH4 789 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 WDR81Q562E7 1941 aa8.93□□□□□ -0.98
EXOSC3-206ENST00000489414 ADGRG4Q8IZF6 3080 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 IGSF3O75054 1194 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 SMIM10L2AP0DMW4 78 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 SMIM10L2BP0DMW5 78 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 PBX3P40426 434 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 CYP4F3Q08477 520 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 FAM102BQ5T8I3 360 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 PDXDC2PQ6P474 469 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 FAM9BQ8IZU0 186 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 SPEM1Q8N4L4 309 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 DYNLL2Q96FJ2 89 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 ZBP1Q9H171 429 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 RNPEPQ9H4A4 650 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 ZSWIM6Q9HCJ5 1215 aa8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 NDRG2Q9UN36 371 aaKnown RBP8.92□□□□□ -0.98
EXOSC3-206ENST00000489414 CELSR1Q9NYQ6 3014 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 CENPEQ02224 2701 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 ICE1Q9Y2F5 2266 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 TERTO14746 1132 aaKnown RBP8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 CYP7A1P22680 504 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 ADSSP30520 456 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 HOXC13P31276 330 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 CD52P31358 61 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 IL12RB1P42701 662 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 CLCN4P51793 760 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 SEMA3BQ13214 749 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 GIT2Q14161 759 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 BMS1Q14692 1282 aaKnown RBP8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 GET4Q7L5D6 327 aaPredicted RBP8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 PRICKLE2Q7Z3G6 844 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 TMEM87AQ8NBN3 555 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 AUTS2Q8WXX7 1259 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 ZNF558Q96NG5 402 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 PSMG3-AS1Q96PY0 264 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 ARID3AQ99856 593 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 C16orf70Q9BSU1 422 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 ZNF768Q9H5H4 540 aaKnown RBP8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 LMAN1LQ9HAT1 526 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 HEBP1Q9NRV9 189 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 SPG21Q9NZD8 308 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 PCDHB7Q9Y5E2 793 aa8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 ZFP37Q9Y6Q3 630 aaPredicted RBP8.91□□□□□ -0.98
EXOSC3-206ENST00000489414 GOLGA4Q13439 2230 aaKnown RBP8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 MYH4Q9Y623 1939 aa8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 BCLAF3A2AJT9 711 aaKnown RBP8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 PPFIA4O75335 1185 aa8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 CYP2D6P10635 497 aa8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 SARSP49591 514 aaKnown RBP8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 ADAM17P78536 824 aa8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 CREB5Q02930 508 aa8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 PLK5Q496M5 336 aa8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 LRRC55Q6ZSA7 311 aa8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 RPAP2Q8IXW5 612 aaPredicted RBP8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 TSR2Q969E8 191 aaKnown RBP8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 MPHOSPH6Q99547 160 aaKnown RBP8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 TCP11L1Q9NUJ3 509 aa8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 MCM9Q9NXL9 1143 aa8.9□□□□□ -0.98
EXOSC3-206ENST00000489414 MTORP42345 2549 aa8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 COL4A2P08572 1712 aa8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 FRMPD4Q14CM0 1322 aa8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 DOCK6Q96HP0 2047 aa8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 CCDC195A0A1B0GUA6 201 aa8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 KHNYNO15037 678 aaKnown RBP8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 AKAP3O75969 853 aa8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 PAPLNO95428 1278 aa8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 SLC30A10Q6XR72 485 aa8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 SLC39A11Q8N1S5 342 aa8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 FZD8Q9H461 694 aa8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 SNRKQ9NRH2 765 aa8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 C2orf42Q9NWW7 574 aa8.89□□□□□ -0.99
EXOSC3-206ENST00000489414 NFIBO00712 420 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 MAN2B1O00754 1011 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 INPPL1O15357 1258 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 CCDC192P0DO97 292 aa8.88□□□□□ -0.99
EXOSC3-206ENST00000489414 CTSAP10619 480 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms