RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 THSD7AQ9UPZ6 1657 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 ZC3H4Q9UPT8 1303 aaKnown RBP8.31□□□□□ -1.08
BEST3-205ENST00000488961 LAD1O00515 517 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 PALMO75781 387 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 GFPT2O94808 682 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 TPP2P29144 1249 aaPredicted RBP8.31□□□□□ -1.08
BEST3-205ENST00000488961 MAGEA8P43361 318 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 PPFIA1Q13136 1202 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 PDCLQ13371 301 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 C2CD6Q53TS8 623 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 GPATCH4Q5T3I0 446 aaKnown RBP8.31□□□□□ -1.08
BEST3-205ENST00000488961 DDX42Q86XP3 938 aaKnown RBP eCLIP8.31□□□□□ -1.08
BEST3-205ENST00000488961 MAB21L3Q8N8X9 362 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 BAP1Q92560 729 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 ZNF668Q96K58 619 aaPredicted RBP8.31□□□□□ -1.08
BEST3-205ENST00000488961 TSG101Q99816 390 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 WDR11Q9BZH6 1224 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 TRIM31Q9BZY9 425 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 RAVER2Q9HCJ3 691 aaKnown RBP8.31□□□□□ -1.08
BEST3-205ENST00000488961 HAUS2Q9NVX0 235 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 TMEM110-MUSTN1A8MSY1 372 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 DPEP1P16444 411 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 GIT2Q14161 759 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 KIAA0753Q2KHM9 967 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 TMEM119Q4V9L6 283 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 AADACL2Q6P093 401 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 MIS18BP1Q6P0N0 1132 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 HHIPL2Q6UWX4 724 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 C15orf52Q6ZUT6 534 aaKnown RBP8.31□□□□□ -1.08
BEST3-205ENST00000488961 BZW1Q7L1Q6 419 aaKnown RBP8.31□□□□□ -1.08
BEST3-205ENST00000488961 TRAPPC11Q7Z392 1133 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 PODNQ7Z5L7 613 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 CPNE8Q86YQ8 564 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 NSMCE1Q8WV22 266 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 ZNF341Q9BYN7 854 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 GBP3Q9H0R5 595 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 RBM12Q9NTZ6 932 aaKnown RBP8.31□□□□□ -1.08
BEST3-205ENST00000488961 HDAC9Q9UKV0 1011 aa8.31□□□□□ -1.08
BEST3-205ENST00000488961 SIPA1L1O43166 1804 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 ZSCAN9O15535 394 aaPredicted RBP8.3□□□□□ -1.08
BEST3-205ENST00000488961 ATMINO43313 823 aaPredicted RBP8.3□□□□□ -1.08
BEST3-205ENST00000488961 STAT2P52630 851 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 SLC12A3P55017 1021 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 PTK2Q05397 1052 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 MYO1EQ12965 1108 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 DLGAP5Q15398 846 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 PLA2G4FQ68DD2 849 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 NSMFQ6X4W1 530 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 B4GALNT4Q76KP1 1039 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 ETNPPLQ8TBG4 499 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 STAMBPL1Q96FJ0 436 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 CCDC114Q96M63 670 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 PLEKHG4BQ96PX9 1271 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 SPAG5Q96R06 1193 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 COL20A1Q9P218 1284 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 SWAP70Q9UH65 585 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 DNM3Q9UQ16 869 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 AGPSO00116 658 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 ONECUT3O60422 494 aaPredicted RBP8.3□□□□□ -1.08
BEST3-205ENST00000488961 MAGEA10P43363 369 aaPredicted RBP8.3□□□□□ -1.08
BEST3-205ENST00000488961 DLG4P78352 724 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 FKBP3Q00688 224 aaKnown RBP8.3□□□□□ -1.08
BEST3-205ENST00000488961 SPIRE1Q08AE8 756 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 KLHL30Q0D2K2 578 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 IFT88Q13099 833 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 PRPF4BQ13523 1007 aaKnown RBP8.3□□□□□ -1.08
BEST3-205ENST00000488961 GNPTABQ3T906 1256 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 STRIP1Q5VSL9 837 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 LMBRD2Q68DH5 695 aaPredicted RBP8.3□□□□□ -1.08
BEST3-205ENST00000488961 CC2D2BQ6DHV5 1058 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 SLC30A9Q6PML9 568 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 PALB2Q86YC2 1186 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 CCDC65Q8IXS2 484 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 GUF1Q8N442 669 aaKnown RBP8.3□□□□□ -1.08
BEST3-205ENST00000488961 ARL10Q8N8L6 244 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 RBM46Q8TBY0 533 aaKnown RBP8.3□□□□□ -1.08
BEST3-205ENST00000488961 HOOK2Q96ED9 719 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
BEST3-205ENST00000488961 PYM1Q9BRP8 204 aaKnown RBP8.3□□□□□ -1.08
BEST3-205ENST00000488961 TRPC6Q9Y210 931 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 PCDHGC5Q9Y5F6 944 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 DOCK5Q9H7D0 1870 aa8.3□□□□□ -1.08
BEST3-205ENST00000488961 USO1O60763 962 aaKnown RBP8.29□□□□□ -1.08
BEST3-205ENST00000488961 SETSIPP0DME0 302 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 VAV2P52735 878 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 NPEPPSP55786 919 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 SPRED3Q2MJR0 410 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 EPC2Q52LR7 807 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 SFMBT2Q5VUG0 894 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 HGSNATQ68CP4 663 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 CWF19L1Q69YN2 538 aaKnown RBP8.29□□□□□ -1.08
BEST3-205ENST00000488961 PDXDC1Q6P996 788 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 SND1Q7KZF4 910 aaKnown RBP eCLIP8.29□□□□□ -1.08
BEST3-205ENST00000488961 FAM114A1Q8IWE2 563 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 FUKQ8N0W3 1084 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 SH2D3CQ8N5H7 860 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 CCDC51Q96ER9 411 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 KCNMB3Q9NPA1 279 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 HOMER3Q9NSC5 361 aa8.29□□□□□ -1.08
BEST3-205ENST00000488961 RABGAP1Q9Y3P9 1069 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms