RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 CREBRFQ8IUR6 639 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 KSR1Q8IVT5 923 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 TRIB2Q92519 343 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 GNEQ9Y223 722 aaKnown RBP12.04□□□□□ -0.48
COL21A1-211ENST00000488912 EVPLQ92817 2033 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 ZBTB42B2RXF5 422 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 PPP1R37O75864 691 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 MMP3P08254 477 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 SLC26A2P50443 739 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 KRT31Q15323 416 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 DRC7Q8IY82 874 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 NOC3LQ8WTT2 800 aaKnown RBP12.04□□□□□ -0.48
COL21A1-211ENST00000488912 SLC7A3Q8WY07 619 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 BSNDQ8WZ55 320 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 KIFAP3Q92845 792 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 STRA6Q9BX79 667 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 IKZF4Q9H2S9 585 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 ERAP1Q9NZ08 941 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 KAT6AQ92794 2004 aa12.04□□□□□ -0.48
COL21A1-211ENST00000488912 DYNC1I1O14576 645 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 CBFA2T2O43439 604 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 MSNP26038 577 aaKnown RBP12.03□□□□□ -0.48
COL21A1-211ENST00000488912 SPAG1Q07617 926 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 DMP1Q13316 513 aaPredicted RBP12.03□□□□□ -0.48
COL21A1-211ENST00000488912 KIF22Q14807 665 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 PTPN21Q16825 1174 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 STXBP4Q6ZWJ1 553 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 TMEM143Q96AN5 459 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 CNOT6LQ96LI5 555 aaKnown RBP12.03□□□□□ -0.48
COL21A1-211ENST00000488912 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 KIFC3Q9BVG8 833 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 POLR3FQ9H1D9 316 aaPredicted RBP12.03□□□□□ -0.48
COL21A1-211ENST00000488912 RNPEPQ9H4A4 650 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 LIMA1Q9UHB6 759 aaKnown RBP12.03□□□□□ -0.48
COL21A1-211ENST00000488912 TRPC6Q9Y210 931 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 UBE4BO95155 1302 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 A0A1B0GTH6 734 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 SLC16A4O15374 487 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 DYNC1LI2O43237 492 aaPredicted RBP12.03□□□□□ -0.48
COL21A1-211ENST00000488912 PPFIA4O75335 1185 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 MAPTP10636 758 aaKnown RBP12.03□□□□□ -0.48
COL21A1-211ENST00000488912 HOXD8P13378 290 aaPredicted RBP12.03□□□□□ -0.48
COL21A1-211ENST00000488912 EEF1GP26641 437 aaKnown RBP12.03□□□□□ -0.48
COL21A1-211ENST00000488912 RFC5P40937 340 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 NPTX2P47972 431 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 NCKAP1LP55160 1127 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 PPP4R3CPQ6ZMV5 832 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 TLK2Q86UE8 772 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 TRPV1Q8NER1 839 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 CD99L2Q8TCZ2 262 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 TYW1Q9NV66 732 aaKnown RBP12.03□□□□□ -0.48
COL21A1-211ENST00000488912 TAB2Q9NYJ8 693 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 TRAF3IP3Q9Y228 551 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
COL21A1-211ENST00000488912 ADGRA3Q8IWK6 1321 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 LRRC10BA6NIK2 292 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 CCDC169A6NNP5 214 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 PDXKO00764 312 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 TGFB1I1O43294 461 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 PTMAP06454 111 aaKnown RBP12.02□□□□□ -0.49
COL21A1-211ENST00000488912 RTP1P59025 263 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 IRX5P78411 483 aaPredicted RBP12.02□□□□□ -0.49
COL21A1-211ENST00000488912 FKBP3Q00688 224 aaKnown RBP12.02□□□□□ -0.49
COL21A1-211ENST00000488912 TBC1D8BQ0IIM8 1120 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 EDRF1Q3B7T1 1238 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 HAUS6Q7Z4H7 955 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 TRAPPC12Q8WVT3 735 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 CTAGE1Q96RT6 745 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 C17orf75Q9HAS0 396 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 MAGEC2Q9UBF1 373 aaPredicted RBP12.02□□□□□ -0.49
COL21A1-211ENST00000488912 NRBP1Q9UHY1 535 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 SIP14410 1827 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 HBP1O60381 514 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 MAFO75444 373 aaPredicted RBP12.02□□□□□ -0.49
COL21A1-211ENST00000488912 CYBAP13498 195 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 ZSCAN20P17040 1043 aaPredicted RBP12.02□□□□□ -0.49
COL21A1-211ENST00000488912 NR2F2P24468 414 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 COPB1P53618 953 aaKnown RBP12.02□□□□□ -0.49
COL21A1-211ENST00000488912 DRP2Q13474 957 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 NR1I3Q14994 352 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 DGKDQ16760 1214 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 FAM114A1Q8IWE2 563 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 TMEM161BQ8NDZ6 487 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 ANKRD20A12PQ8NF67 263 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 VPS16Q9H269 839 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 ST6GALNAC4Q9H4F1 302 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 FAM184BQ9ULE4 1060 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 R3HCC1Q9Y3T6 440 aaKnown RBP12.02□□□□□ -0.49
COL21A1-211ENST00000488912 PPME1Q9Y570 386 aa12.02□□□□□ -0.49
COL21A1-211ENST00000488912 A6NJR5 290 aa12.01□□□□□ -0.49
COL21A1-211ENST00000488912 H3BRB1 525 aa12.01□□□□□ -0.49
COL21A1-211ENST00000488912 TEX33O43247 280 aa12.01□□□□□ -0.49
COL21A1-211ENST00000488912 CALUO43852 315 aaPredicted RBP12.01□□□□□ -0.49
COL21A1-211ENST00000488912 TPM3P06753 285 aa12.01□□□□□ -0.49
COL21A1-211ENST00000488912 SMTNP53814 917 aa12.01□□□□□ -0.49
COL21A1-211ENST00000488912 GTF2BQ00403 316 aa12.01□□□□□ -0.49
COL21A1-211ENST00000488912 TRIM32Q13049 653 aa12.01□□□□□ -0.49
COL21A1-211ENST00000488912 ALCAMQ13740 583 aa12.01□□□□□ -0.49
COL21A1-211ENST00000488912 MFSD14CQ5VZR4 134 aa12.01□□□□□ -0.49
COL21A1-211ENST00000488912 ZC3H3Q8IXZ2 948 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms