RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SLC5A5Q92911 643 aa20.79■□□□□ 0.92
HDAC6-231ENST00000488905 CDCA3Q99618 268 aaPredicted RBP20.79■□□□□ 0.92
HDAC6-231ENST00000488905 TEKT3Q9BXF9 490 aa20.79■□□□□ 0.92
HDAC6-231ENST00000488905 UNC45AQ9H3U1 944 aa20.79■□□□□ 0.92
HDAC6-231ENST00000488905 NRBP2Q9NSY0 501 aa20.79■□□□□ 0.92
HDAC6-231ENST00000488905 RNF19AQ9NV58 838 aa20.79■□□□□ 0.92
HDAC6-231ENST00000488905 USP15Q9Y4E8 981 aaPredicted RBP20.79■□□□□ 0.92
HDAC6-231ENST00000488905 FSCN2O14926 492 aa20.78■□□□□ 0.92
HDAC6-231ENST00000488905 PER2O15055 1255 aa20.78■□□□□ 0.92
HDAC6-231ENST00000488905 GPC3P51654 580 aa20.78■□□□□ 0.92
HDAC6-231ENST00000488905 NLRP5P59047 1200 aa20.78■□□□□ 0.92
HDAC6-231ENST00000488905 ERVFC1P60507 584 aa20.78■□□□□ 0.92
HDAC6-231ENST00000488905 TOB2Q14106 344 aaPredicted RBP20.78■□□□□ 0.92
HDAC6-231ENST00000488905 DUSP6Q16828 381 aa20.78■□□□□ 0.92
HDAC6-231ENST00000488905 PDE12Q6L8Q7 609 aaKnown RBP20.78■□□□□ 0.92
HDAC6-231ENST00000488905 TRIM22Q8IYM9 498 aa20.78■□□□□ 0.92
HDAC6-231ENST00000488905 VN1R2Q8NFZ6 395 aa20.78■□□□□ 0.92
HDAC6-231ENST00000488905 TBCKQ8TEA7 893 aa20.78■□□□□ 0.92
HDAC6-231ENST00000488905 ZNF668Q96K58 619 aaPredicted RBP20.78■□□□□ 0.92
HDAC6-231ENST00000488905 CASD1Q96PB1 797 aa20.78■□□□□ 0.92
HDAC6-231ENST00000488905 LZTS1Q9Y250 596 aa20.78■□□□□ 0.92
HDAC6-231ENST00000488905 ZSCAN20P17040 1043 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-231ENST00000488905 TBC1D8BQ0IIM8 1120 aa20.77■□□□□ 0.92
HDAC6-231ENST00000488905 PLPP4Q5VZY2 271 aa20.77■□□□□ 0.92
HDAC6-231ENST00000488905 HFE2Q6ZVN8 426 aa20.77■□□□□ 0.92
HDAC6-231ENST00000488905 RUFY3Q7L099 469 aa20.77■□□□□ 0.92
HDAC6-231ENST00000488905 ABI1Q8IZP0 508 aa20.77■□□□□ 0.92
HDAC6-231ENST00000488905 MRPS27Q92552 414 aaKnown RBP20.77■□□□□ 0.92
HDAC6-231ENST00000488905 GJA10Q969M2 543 aa20.77■□□□□ 0.92
HDAC6-231ENST00000488905 SCLT1Q96NL6 688 aa20.77■□□□□ 0.92
HDAC6-231ENST00000488905 C22orf23Q9BZE7 217 aa20.77■□□□□ 0.92
HDAC6-231ENST00000488905 LOC730098B7Z3J9 87 aa20.76■□□□□ 0.91
HDAC6-231ENST00000488905 PSMD10O75832 226 aa20.76■□□□□ 0.91
HDAC6-231ENST00000488905 DARSP14868 501 aaKnown RBP20.76■□□□□ 0.91
HDAC6-231ENST00000488905 PPM1AP35813 382 aa20.76■□□□□ 0.91
HDAC6-231ENST00000488905 RBM10P98175 930 aaKnown RBP20.76■□□□□ 0.91
HDAC6-231ENST00000488905 PLCB3Q01970 1234 aa20.76■□□□□ 0.91
HDAC6-231ENST00000488905 Q4G0T1 1027 aa20.76■□□□□ 0.91
HDAC6-231ENST00000488905 LRRC55Q6ZSA7 311 aa20.76■□□□□ 0.91
HDAC6-231ENST00000488905 ECHDC2Q86YB7 292 aa20.76■□□□□ 0.91
HDAC6-231ENST00000488905 RDM1Q8NG50 284 aa20.76■□□□□ 0.91
HDAC6-231ENST00000488905 SEPT9Q9UHD8 586 aaPredicted RBP20.76■□□□□ 0.91
HDAC6-231ENST00000488905 PCDHA4Q9UN74 947 aa20.76■□□□□ 0.91
HDAC6-231ENST00000488905 ZDBF2Q9HCK1 2354 aa20.76■□□□□ 0.91
HDAC6-231ENST00000488905 ARID2Q68CP9 1835 aa20.76■□□□□ 0.91
HDAC6-231ENST00000488905 TDP2O95551 362 aa20.75■□□□□ 0.91
HDAC6-231ENST00000488905 SSRP1Q08945 709 aaKnown RBP20.75■□□□□ 0.91
HDAC6-231ENST00000488905 TARBP2Q15633 366 aaKnown RBP20.75■□□□□ 0.91
HDAC6-231ENST00000488905 CLLU1OSQ5K130 101 aa20.75■□□□□ 0.91
HDAC6-231ENST00000488905 KCNT2Q6UVM3 1135 aa20.75■□□□□ 0.91
HDAC6-231ENST00000488905 MIER3Q7Z3K6 550 aa20.75■□□□□ 0.91
HDAC6-231ENST00000488905 NLRP7Q8WX94 980 aa20.75■□□□□ 0.91
HDAC6-231ENST00000488905 ZNF558Q96NG5 402 aa20.75■□□□□ 0.91
HDAC6-231ENST00000488905 TCF25Q9BQ70 676 aa20.75■□□□□ 0.91
HDAC6-231ENST00000488905 ZSWIM6Q9HCJ5 1215 aa20.75■□□□□ 0.91
HDAC6-231ENST00000488905 ENTPD7Q9NQZ7 604 aa20.75■□□□□ 0.91
HDAC6-231ENST00000488905 PUF60Q9UHX1 559 aaKnown RBP20.75■□□□□ 0.91
HDAC6-231ENST00000488905 DEXIO95424 95 aa20.74■□□□□ 0.91
HDAC6-231ENST00000488905 SRGAP2BP0DMP2 458 aa20.74■□□□□ 0.91
HDAC6-231ENST00000488905 FGFR4P22455 802 aa20.74■□□□□ 0.91
HDAC6-231ENST00000488905 PBX3P40426 434 aa20.74■□□□□ 0.91
HDAC6-231ENST00000488905 DRP2Q13474 957 aa20.74■□□□□ 0.91
HDAC6-231ENST00000488905 CBX2Q14781 532 aaPredicted RBP20.74■□□□□ 0.91
HDAC6-231ENST00000488905 MTERF2Q49AM1 385 aa20.74■□□□□ 0.91
HDAC6-231ENST00000488905 B3GNT9Q6UX72 402 aa20.74■□□□□ 0.91
HDAC6-231ENST00000488905 KMT2EQ8IZD2 1858 aa20.74■□□□□ 0.91
HDAC6-231ENST00000488905 DAGLBQ8NCG7 672 aa20.74■□□□□ 0.91
HDAC6-231ENST00000488905 RNF169Q8NCN4 708 aa20.74■□□□□ 0.91
HDAC6-231ENST00000488905 SUSD6Q92537 303 aa20.74■□□□□ 0.91
HDAC6-231ENST00000488905 PHF7Q9BWX1 381 aaPredicted RBP20.74■□□□□ 0.91
HDAC6-231ENST00000488905 KCNH6Q9H252 994 aa20.74■□□□□ 0.91
HDAC6-231ENST00000488905 CYP3A7-CYP3A51PA0A087WV96 503 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 A0A0U1RQF3 1178 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 M0R2N6 131 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 CPLX1O14810 134 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 EPB41L2O43491 1005 aaKnown RBP20.73■□□□□ 0.91
HDAC6-231ENST00000488905 ATF7P17544 494 aaPredicted RBP20.73■□□□□ 0.91
HDAC6-231ENST00000488905 CYP3A7P24462 503 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 KCNC3Q14003 757 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 NPY5RQ15761 445 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 XKR3Q5GH77 459 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 ZNF598Q86UK7 904 aaKnown RBP20.73■□□□□ 0.91
HDAC6-231ENST00000488905 BLIDQ8IZY5 108 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 ETNPPLQ8TBG4 499 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 EDAQ92838 391 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 NGRNQ9NPE2 291 aaKnown RBP20.73■□□□□ 0.91
HDAC6-231ENST00000488905 DACT1Q9NYF0 836 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 CYP46A1Q9Y6A2 500 aa20.73■□□□□ 0.91
HDAC6-231ENST00000488905 TMEM150BA6NC51 233 aa20.72■□□□□ 0.91
HDAC6-231ENST00000488905 MOXD1Q6UVY6 613 aa20.72■□□□□ 0.91
HDAC6-231ENST00000488905 TMEM184AQ6ZMB5 413 aa20.72■□□□□ 0.91
HDAC6-231ENST00000488905 FAM177A1Q8N128 213 aaPredicted RBP20.72■□□□□ 0.91
HDAC6-231ENST00000488905 HELQQ8TDG4 1101 aa20.72■□□□□ 0.91
HDAC6-231ENST00000488905 ZNF274Q96GC6 653 aaPredicted RBP20.72■□□□□ 0.91
HDAC6-231ENST00000488905 MFSD14AQ96MC6 490 aa20.72■□□□□ 0.91
HDAC6-231ENST00000488905 MBOAT7Q96N66 472 aa20.72■□□□□ 0.91
HDAC6-231ENST00000488905 CEP89Q96ST8 783 aa20.72■□□□□ 0.91
HDAC6-231ENST00000488905 MRPL9Q9BYD2 267 aaKnown RBP20.72■□□□□ 0.91
HDAC6-231ENST00000488905 NIFKQ9BYG3 293 aaKnown RBP20.72■□□□□ 0.91
HDAC6-231ENST00000488905 GCOM2Q9BZD3 368 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms