RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 EFCAB12Q6NXP0 572 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 TMC7Q7Z402 723 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 ECHDC2Q86YB7 292 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 CASP10Q92851 521 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 PHOX2BQ99453 314 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 ADAMTS10Q9H324 1103 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 RNF19AQ9NV58 838 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 NR2E1Q9Y466 385 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 SAMM50Q9Y512 469 aa21.56■■□□□ 1.04
GGPS1-206ENST00000488594 HIDE1A8MVS5 230 aa21.55■■□□□ 1.04
GGPS1-206ENST00000488594 CIITAP33076 1130 aa21.55■■□□□ 1.04
GGPS1-206ENST00000488594 METAP2P50579 478 aaKnown RBP eCLIP21.55■■□□□ 1.04
GGPS1-206ENST00000488594 FGD1P98174 961 aa21.55■■□□□ 1.04
GGPS1-206ENST00000488594 BMP2KLQ5H9B9 411 aa21.55■■□□□ 1.04
GGPS1-206ENST00000488594 ZBTB33Q86T24 672 aa21.55■■□□□ 1.04
GGPS1-206ENST00000488594 LINC01465Q8N7H1 131 aa21.55■■□□□ 1.04
GGPS1-206ENST00000488594 NECTIN4Q96NY8 510 aa21.55■■□□□ 1.04
GGPS1-206ENST00000488594 NRBP2Q9NSY0 501 aa21.55■■□□□ 1.04
GGPS1-206ENST00000488594 NAP1L2Q9ULW6 460 aaPredicted RBP21.55■■□□□ 1.04
GGPS1-206ENST00000488594 ZDBF2Q9HCK1 2354 aa21.54■■□□□ 1.04
GGPS1-206ENST00000488594 NUBP1P53384 320 aa21.54■■□□□ 1.04
GGPS1-206ENST00000488594 SMC1AQ14683 1233 aaKnown RBP21.54■■□□□ 1.04
GGPS1-206ENST00000488594 BMS1Q14692 1282 aaKnown RBP21.54■■□□□ 1.04
GGPS1-206ENST00000488594 ADCK5Q3MIX3 580 aa21.54■■□□□ 1.04
GGPS1-206ENST00000488594 CES5AQ6NT32 575 aa21.54■■□□□ 1.04
GGPS1-206ENST00000488594 LLGL2Q6P1M3 1020 aa21.54■■□□□ 1.04
GGPS1-206ENST00000488594 MRPL43Q8N983 215 aaKnown RBP21.54■■□□□ 1.04
GGPS1-206ENST00000488594 BICD2Q8TD16 824 aa21.54■■□□□ 1.04
GGPS1-206ENST00000488594 RSPH1Q8WYR4 309 aa21.54■■□□□ 1.04
GGPS1-206ENST00000488594 MRPL9Q9BYD2 267 aaKnown RBP21.54■■□□□ 1.04
GGPS1-206ENST00000488594 A0A0U1RQF3 1178 aa21.53■■□□□ 1.04
GGPS1-206ENST00000488594 ST18O60284 1047 aa21.53■■□□□ 1.04
GGPS1-206ENST00000488594 EOMESO95936 686 aa21.53■■□□□ 1.04
GGPS1-206ENST00000488594 OATP04181 439 aa21.53■■□□□ 1.04
GGPS1-206ENST00000488594 AVPR2P30518 371 aa21.53■■□□□ 1.04
GGPS1-206ENST00000488594 ADD1P35611 737 aaKnown RBP21.53■■□□□ 1.04
GGPS1-206ENST00000488594 IRX6P78412 446 aaPredicted RBP21.53■■□□□ 1.04
GGPS1-206ENST00000488594 ITIH3Q06033 890 aa21.53■■□□□ 1.04
GGPS1-206ENST00000488594 RASEFQ8IZ41 740 aa21.53■■□□□ 1.04
GGPS1-206ENST00000488594 SLC39A11Q8N1S5 342 aa21.53■■□□□ 1.04
GGPS1-206ENST00000488594 LRRC71Q8N4P6 559 aa21.53■■□□□ 1.04
GGPS1-206ENST00000488594 DACT1Q9NYF0 836 aa21.53■■□□□ 1.04
GGPS1-206ENST00000488594 DARSP14868 501 aaKnown RBP21.52■■□□□ 1.04
GGPS1-206ENST00000488594 PBX3P40426 434 aa21.52■■□□□ 1.04
GGPS1-206ENST00000488594 GPC3P51654 580 aa21.52■■□□□ 1.04
GGPS1-206ENST00000488594 CLLU1OSQ5K130 101 aa21.52■■□□□ 1.04
GGPS1-206ENST00000488594 RNF169Q8NCN4 708 aa21.52■■□□□ 1.04
GGPS1-206ENST00000488594 SCLT1Q96NL6 688 aa21.52■■□□□ 1.04
GGPS1-206ENST00000488594 APOL5Q9BWW9 433 aa21.52■■□□□ 1.04
GGPS1-206ENST00000488594 ADAM7Q9H2U9 754 aa21.52■■□□□ 1.04
GGPS1-206ENST00000488594 DISC1Q9NRI5 854 aa21.52■■□□□ 1.04
GGPS1-206ENST00000488594 HCFC2Q9Y5Z7 792 aa21.52■■□□□ 1.04
GGPS1-206ENST00000488594 EVPLQ92817 2033 aa21.52■■□□□ 1.04
GGPS1-206ENST00000488594 CARNS1A5YM72 827 aa21.51■■□□□ 1.03
GGPS1-206ENST00000488594 SFNP31947 248 aa21.51■■□□□ 1.03
GGPS1-206ENST00000488594 ALDH7A1P49419 539 aaKnown RBP21.51■■□□□ 1.03
GGPS1-206ENST00000488594 VCPP55072 806 aaKnown RBP21.51■■□□□ 1.03
GGPS1-206ENST00000488594 CDC42EP1Q00587 391 aa21.51■■□□□ 1.03
GGPS1-206ENST00000488594 PRKCEQ02156 737 aa21.51■■□□□ 1.03
GGPS1-206ENST00000488594 ZNF598Q86UK7 904 aaKnown RBP21.51■■□□□ 1.03
GGPS1-206ENST00000488594 UBALD2Q8IYN6 164 aa21.51■■□□□ 1.03
GGPS1-206ENST00000488594 LENG9Q96B70 501 aa21.51■■□□□ 1.03
GGPS1-206ENST00000488594 RIT2Q99578 217 aa21.51■■□□□ 1.03
GGPS1-206ENST00000488594 C2orf71A6NGG8 1288 aa21.5■■□□□ 1.03
GGPS1-206ENST00000488594 PRPF3O43395 683 aaKnown RBP21.5■■□□□ 1.03
GGPS1-206ENST00000488594 ZNF862O60290 1169 aa21.5■■□□□ 1.03
GGPS1-206ENST00000488594 AKAP17AQ02040 695 aaKnown RBP21.5■■□□□ 1.03
GGPS1-206ENST00000488594 TBC1D8BQ0IIM8 1120 aa21.5■■□□□ 1.03
GGPS1-206ENST00000488594 MTMR3Q13615 1198 aa21.5■■□□□ 1.03
GGPS1-206ENST00000488594 CCDC148Q8NFR7 591 aa21.5■■□□□ 1.03
GGPS1-206ENST00000488594 RIPOR3Q96MK2 946 aa21.5■■□□□ 1.03
GGPS1-206ENST00000488594 CHST12Q9NRB3 414 aa21.5■■□□□ 1.03
GGPS1-206ENST00000488594 TSHZ2Q9NRE2 1034 aa21.5■■□□□ 1.03
GGPS1-206ENST00000488594 SORCS3Q9UPU3 1222 aa21.5■■□□□ 1.03
GGPS1-206ENST00000488594 NID2Q14112 1375 aa21.5■■□□□ 1.03
GGPS1-206ENST00000488594 ADAMTS3O15072 1205 aa21.49■■□□□ 1.03
GGPS1-206ENST00000488594 JAK3P52333 1124 aa21.49■■□□□ 1.03
GGPS1-206ENST00000488594 KREMEN2Q8NCW0 462 aa21.49■■□□□ 1.03
GGPS1-206ENST00000488594 NLRP7Q8WX94 980 aa21.49■■□□□ 1.03
GGPS1-206ENST00000488594 MYH9P35579 1960 aaKnown RBP21.49■■□□□ 1.03
GGPS1-206ENST00000488594 KMT2EQ8IZD2 1858 aa21.49■■□□□ 1.03
GGPS1-206ENST00000488594 GAS7O60861 476 aa21.48■■□□□ 1.03
GGPS1-206ENST00000488594 CLASP2O75122 1294 aaKnown RBP21.48■■□□□ 1.03
GGPS1-206ENST00000488594 SP100P23497 879 aaPredicted RBP21.48■■□□□ 1.03
GGPS1-206ENST00000488594 MTHFRP42898 656 aa21.48■■□□□ 1.03
GGPS1-206ENST00000488594 USP11P51784 963 aa21.48■■□□□ 1.03
GGPS1-206ENST00000488594 HELQQ8TDG4 1101 aa21.48■■□□□ 1.03
GGPS1-206ENST00000488594 TMEM169Q96HH4 297 aa21.48■■□□□ 1.03
GGPS1-206ENST00000488594 TRAIPQ9BWF2 469 aa21.48■■□□□ 1.03
GGPS1-206ENST00000488594 GCOM2Q9BZD3 368 aaPredicted RBP21.48■■□□□ 1.03
GGPS1-206ENST00000488594 MSH4O15457 936 aa21.48■■□□□ 1.03
GGPS1-206ENST00000488594 BCAR1P56945 870 aa21.48■■□□□ 1.03
GGPS1-206ENST00000488594 GIT2Q14161 759 aa21.48■■□□□ 1.03
GGPS1-206ENST00000488594 RDM1Q8NG50 284 aa21.48■■□□□ 1.03
GGPS1-206ENST00000488594 ATOH1Q92858 354 aaPredicted RBP21.48■■□□□ 1.03
GGPS1-206ENST00000488594 CCDC136Q96JN2 1154 aa21.48■■□□□ 1.03
GGPS1-206ENST00000488594 ZNF668Q96K58 619 aaPredicted RBP21.48■■□□□ 1.03
GGPS1-206ENST00000488594 RNF26Q9BY78 433 aaPredicted RBP21.48■■□□□ 1.03
GGPS1-206ENST00000488594 POMKQ9H5K3 350 aa21.48■■□□□ 1.03
GGPS1-206ENST00000488594 DZANK1Q9NVP4 752 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms