RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 JPH2Q9BR39 696 aaPredicted RBP25.93■■□□□ 1.74
CUL4A-209ENST00000488558 JAK2O60674 1132 aa25.92■■□□□ 1.74
CUL4A-209ENST00000488558 MAFO75444 373 aaPredicted RBP25.92■■□□□ 1.74
CUL4A-209ENST00000488558 P4HBP07237 508 aaKnown RBP25.92■■□□□ 1.74
CUL4A-209ENST00000488558 DNM2P50570 870 aa25.92■■□□□ 1.74
CUL4A-209ENST00000488558 PABPC5Q96DU9 382 aaKnown RBP25.92■■□□□ 1.74
CUL4A-209ENST00000488558 PLAGL2Q9UPG8 496 aa25.92■■□□□ 1.74
CUL4A-209ENST00000488558 ARID2Q68CP9 1835 aa25.92■■□□□ 1.74
CUL4A-209ENST00000488558 TMEM150BA6NC51 233 aa25.91■■□□□ 1.74
CUL4A-209ENST00000488558 FAM205CA6NFA0 338 aa25.91■■□□□ 1.74
CUL4A-209ENST00000488558 DDX11L8A8MPP1 907 aa25.91■■□□□ 1.74
CUL4A-209ENST00000488558 NCK2O43639 380 aa25.91■■□□□ 1.74
CUL4A-209ENST00000488558 GATMP50440 423 aa25.91■■□□□ 1.74
CUL4A-209ENST00000488558 ST3GAL1Q11201 340 aa25.91■■□□□ 1.74
CUL4A-209ENST00000488558 TRIM29Q14134 588 aa25.91■■□□□ 1.74
CUL4A-209ENST00000488558 EPHA7Q15375 998 aa25.91■■□□□ 1.74
CUL4A-209ENST00000488558 NLRP7Q8WX94 980 aa25.91■■□□□ 1.74
CUL4A-209ENST00000488558 SCLT1Q96NL6 688 aa25.91■■□□□ 1.74
CUL4A-209ENST00000488558 ATP6V0A4Q9HBG4 840 aa25.91■■□□□ 1.74
CUL4A-209ENST00000488558 HOXA2O43364 376 aa25.9■■□□□ 1.74
CUL4A-209ENST00000488558 MARCH6O60337 910 aa25.9■■□□□ 1.74
CUL4A-209ENST00000488558 BAG4O95429 457 aaKnown RBP25.9■■□□□ 1.74
CUL4A-209ENST00000488558 ZSCAN20P17040 1043 aaPredicted RBP25.9■■□□□ 1.74
CUL4A-209ENST00000488558 KCNA5P22460 613 aa25.9■■□□□ 1.74
CUL4A-209ENST00000488558 SPIRE1Q08AE8 756 aa25.9■■□□□ 1.74
CUL4A-209ENST00000488558 DRP2Q13474 957 aa25.9■■□□□ 1.74
CUL4A-209ENST00000488558 ZNF410Q86VK4 478 aa25.9■■□□□ 1.74
CUL4A-209ENST00000488558 DIS3L2Q8IYB7 885 aaKnown RBP25.9■■□□□ 1.74
CUL4A-209ENST00000488558 EXOC8Q8IYI6 725 aa25.9■■□□□ 1.74
CUL4A-209ENST00000488558 NEK9Q8TD19 979 aa25.9■■□□□ 1.74
CUL4A-209ENST00000488558 GCOM2Q9BZD3 368 aaPredicted RBP25.9■■□□□ 1.74
CUL4A-209ENST00000488558 CYP26B1Q9NR63 512 aa25.9■■□□□ 1.74
CUL4A-209ENST00000488558 LIMCH1Q9UPQ0 1083 aa25.9■■□□□ 1.74
CUL4A-209ENST00000488558 PLXNA4Q9HCM2 1894 aa25.89■■□□□ 1.74
CUL4A-209ENST00000488558 PUS10Q3MIT2 529 aaKnown RBP25.89■■□□□ 1.74
CUL4A-209ENST00000488558 C4orf19Q8IY42 314 aa25.89■■□□□ 1.74
CUL4A-209ENST00000488558 NECAB3Q96P71 396 aaPredicted RBP25.89■■□□□ 1.74
CUL4A-209ENST00000488558 AAASQ9NRG9 546 aa25.89■■□□□ 1.74
CUL4A-209ENST00000488558 TBKBP1A7MCY6 615 aa25.88■■□□□ 1.73
CUL4A-209ENST00000488558 BTBD18B2RXH4 712 aa25.88■■□□□ 1.73
CUL4A-209ENST00000488558 ITGB1P05556 798 aa25.88■■□□□ 1.73
CUL4A-209ENST00000488558 CSPP1Q1MSJ5 1256 aa25.88■■□□□ 1.73
CUL4A-209ENST00000488558 FAM102BQ5T8I3 360 aa25.88■■□□□ 1.73
CUL4A-209ENST00000488558 PLA2G4FQ68DD2 849 aa25.88■■□□□ 1.73
CUL4A-209ENST00000488558 KLHL23Q8NBE8 558 aa25.88■■□□□ 1.73
CUL4A-209ENST00000488558 SPPL3Q8TCT6 385 aa25.88■■□□□ 1.73
CUL4A-209ENST00000488558 SLC7A3Q8WY07 619 aa25.88■■□□□ 1.73
CUL4A-209ENST00000488558 SH2D3AQ9BRG2 576 aa25.88■■□□□ 1.73
CUL4A-209ENST00000488558 LLPHQ9BRT6 129 aaKnown RBP25.88■■□□□ 1.73
CUL4A-209ENST00000488558 LXNQ9BS40 222 aa25.88■■□□□ 1.73
CUL4A-209ENST00000488558 TMEM117Q9H0C3 514 aa25.88■■□□□ 1.73
CUL4A-209ENST00000488558 ALG13Q9NP73 1137 aaKnown RBP25.88■■□□□ 1.73
CUL4A-209ENST00000488558 SUCLA2Q9P2R7 463 aaPredicted RBP25.88■■□□□ 1.73
CUL4A-209ENST00000488558 IBSPP21815 317 aaPredicted RBP25.87■■□□□ 1.73
CUL4A-209ENST00000488558 SFPQP23246 707 aaKnown RBP eCLIP25.87■■□□□ 1.73
CUL4A-209ENST00000488558 RFC5P40937 340 aa25.87■■□□□ 1.73
CUL4A-209ENST00000488558 CAMK1Q14012 370 aa25.87■■□□□ 1.73
CUL4A-209ENST00000488558 C8orf34Q49A92 452 aa25.87■■□□□ 1.73
CUL4A-209ENST00000488558 ZNF668Q96K58 619 aaPredicted RBP25.87■■□□□ 1.73
CUL4A-209ENST00000488558 INO80BQ9C086 356 aaPredicted RBP25.87■■□□□ 1.73
CUL4A-209ENST00000488558 CHST12Q9NRB3 414 aa25.87■■□□□ 1.73
CUL4A-209ENST00000488558 DACT1Q9NYF0 836 aa25.87■■□□□ 1.73
CUL4A-209ENST00000488558 WRAP73Q9P2S5 460 aaPredicted RBP25.87■■□□□ 1.73
CUL4A-209ENST00000488558 PCDHB12Q9Y5F1 795 aa25.87■■□□□ 1.73
CUL4A-209ENST00000488558 FGFR1P11362 822 aa25.86■■□□□ 1.73
CUL4A-209ENST00000488558 UBE3AQ05086 875 aa25.86■■□□□ 1.73
CUL4A-209ENST00000488558 CTC1Q2NKJ3 1217 aa25.86■■□□□ 1.73
CUL4A-209ENST00000488558 NCAPH2Q6IBW4 605 aa25.86■■□□□ 1.73
CUL4A-209ENST00000488558 ECHDC2Q86YB7 292 aa25.86■■□□□ 1.73
CUL4A-209ENST00000488558 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.86■■□□□ 1.73
CUL4A-209ENST00000488558 PPP2R3CQ969Q6 453 aa25.86■■□□□ 1.73
CUL4A-209ENST00000488558 CEP170P1Q96L14 293 aa25.86■■□□□ 1.73
CUL4A-209ENST00000488558 TRAIPQ9BWF2 469 aa25.86■■□□□ 1.73
CUL4A-209ENST00000488558 DHX33Q9H6R0 707 aaKnown RBP25.86■■□□□ 1.73
CUL4A-209ENST00000488558 ZSWIM4Q9H7M6 989 aa25.86■■□□□ 1.73
CUL4A-209ENST00000488558 A0A087WZ62 844 aa25.85■■□□□ 1.73
CUL4A-209ENST00000488558 A0A0U1RQF3 1178 aa25.85■■□□□ 1.73
CUL4A-209ENST00000488558 GAS2O43903 313 aaKnown RBP25.85■■□□□ 1.73
CUL4A-209ENST00000488558 LAG3P18627 525 aa25.85■■□□□ 1.73
CUL4A-209ENST00000488558 YWHABP31946 246 aaKnown RBP25.85■■□□□ 1.73
CUL4A-209ENST00000488558 HYAL1Q12794 435 aa25.85■■□□□ 1.73
CUL4A-209ENST00000488558 CALCRLQ16602 461 aa25.85■■□□□ 1.73
CUL4A-209ENST00000488558 OTUD6AQ7L8S5 288 aa25.85■■□□□ 1.73
CUL4A-209ENST00000488558 RHPN2Q8IUC4 686 aa25.85■■□□□ 1.73
CUL4A-209ENST00000488558 RSPH1Q8WYR4 309 aa25.85■■□□□ 1.73
CUL4A-209ENST00000488558 ZSCAN31Q96LW9 406 aaPredicted RBP25.85■■□□□ 1.73
CUL4A-209ENST00000488558 FDXACB1Q9BRP7 624 aaPredicted RBP25.85■■□□□ 1.73
CUL4A-209ENST00000488558 RNF19AQ9NV58 838 aa25.85■■□□□ 1.73
CUL4A-209ENST00000488558 PCDHA12Q9UN75 941 aa25.85■■□□□ 1.73
CUL4A-209ENST00000488558 NEMFO60524 1076 aa25.84■■□□□ 1.73
CUL4A-209ENST00000488558 EOMESO95936 686 aa25.84■■□□□ 1.73
CUL4A-209ENST00000488558 DNAJB1P25685 340 aa25.84■■□□□ 1.73
CUL4A-209ENST00000488558 POLGP54098 1239 aaPredicted RBP25.84■■□□□ 1.73
CUL4A-209ENST00000488558 NPEPPSP55786 919 aa25.84■■□□□ 1.73
CUL4A-209ENST00000488558 SAFBQ15424 915 aaKnown RBP eCLIP25.84■■□□□ 1.73
CUL4A-209ENST00000488558 SPOUT1Q5T280 376 aaKnown RBP25.84■■□□□ 1.73
CUL4A-209ENST00000488558 ZNF598Q86UK7 904 aaKnown RBP25.84■■□□□ 1.73
CUL4A-209ENST00000488558 LRRC43Q8N309 656 aa25.84■■□□□ 1.73
CUL4A-209ENST00000488558 POF1BQ8WVV4 589 aa25.84■■□□□ 1.73
CUL4A-209ENST00000488558 DYDC2Q96IM9 177 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms