RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 MAFO75444 373 aaPredicted RBP19.87■□□□□ 0.77
ITGB1-215ENST00000488494 DNM2P50570 870 aa19.87■□□□□ 0.77
ITGB1-215ENST00000488494 GPM6BQ13491 265 aa19.87■□□□□ 0.77
ITGB1-215ENST00000488494 GNL2Q13823 731 aaKnown RBP19.87■□□□□ 0.77
ITGB1-215ENST00000488494 FAM43BQ6ZT52 329 aaPredicted RBP19.87■□□□□ 0.77
ITGB1-215ENST00000488494 SLC24A5Q71RS6 500 aa19.87■□□□□ 0.77
ITGB1-215ENST00000488494 ZNF579Q8NAF0 562 aaKnown RBP19.87■□□□□ 0.77
ITGB1-215ENST00000488494 FBXO18Q8NFZ0 1043 aa19.87■□□□□ 0.77
ITGB1-215ENST00000488494 SLC7A3Q8WY07 619 aa19.87■□□□□ 0.77
ITGB1-215ENST00000488494 CLP1Q92989 425 aaKnown RBP19.87■□□□□ 0.77
ITGB1-215ENST00000488494 CEP170P1Q96L14 293 aa19.87■□□□□ 0.77
ITGB1-215ENST00000488494 FOXP1Q9H334 677 aaPredicted RBP19.87■□□□□ 0.77
ITGB1-215ENST00000488494 TTC12Q9H892 705 aaPredicted RBP19.87■□□□□ 0.77
ITGB1-215ENST00000488494 BMP2KQ9NSY1 1161 aaPredicted RBP19.87■□□□□ 0.77
ITGB1-215ENST00000488494 SUCLA2Q9P2R7 463 aaPredicted RBP19.87■□□□□ 0.77
ITGB1-215ENST00000488494 RWDD3Q9Y3V2 267 aa19.87■□□□□ 0.77
ITGB1-215ENST00000488494 C9IYK1 514 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 FGFR4P22455 802 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 YWHABP31946 246 aaKnown RBP19.86■□□□□ 0.77
ITGB1-215ENST00000488494 TXKP42681 527 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 POLGP54098 1239 aaPredicted RBP19.86■□□□□ 0.77
ITGB1-215ENST00000488494 TFF2Q03403 129 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 DSC3Q14574 896 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 PTPROQ16827 1216 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 C4orf19Q8IY42 314 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 MRPL38Q96DV4 380 aaKnown RBP19.86■□□□□ 0.77
ITGB1-215ENST00000488494 TBC1D32Q96NH3 1257 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 ASB2Q96Q27 587 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 MTMR9Q96QG7 549 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 EIF2AK1Q9BQI3 630 aaKnown RBP19.86■□□□□ 0.77
ITGB1-215ENST00000488494 JPH2Q9BR39 696 aaPredicted RBP19.86■□□□□ 0.77
ITGB1-215ENST00000488494 C11orf84Q9BUA3 381 aaPredicted RBP19.86■□□□□ 0.77
ITGB1-215ENST00000488494 TMEM60Q9H2L4 133 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 ZSWIM4Q9H7M6 989 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 PCDHA12Q9UN75 941 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 PCDHB7Q9Y5E2 793 aa19.86■□□□□ 0.77
ITGB1-215ENST00000488494 POTEMA6NI47 508 aa19.85■□□□□ 0.77
ITGB1-215ENST00000488494 C5orf67F2Z3F1 127 aa19.85■□□□□ 0.77
ITGB1-215ENST00000488494 CSDE1O75534 798 aaKnown RBP19.85■□□□□ 0.77
ITGB1-215ENST00000488494 CD2BP2O95400 341 aaKnown RBP19.85■□□□□ 0.77
ITGB1-215ENST00000488494 RFC5P40937 340 aa19.85■□□□□ 0.77
ITGB1-215ENST00000488494 MRPS5P82675 430 aaKnown RBP19.85■□□□□ 0.77
ITGB1-215ENST00000488494 RHPN2Q8IUC4 686 aa19.85■□□□□ 0.77
ITGB1-215ENST00000488494 NOSTRINQ8IVI9 506 aa19.85■□□□□ 0.77
ITGB1-215ENST00000488494 TPH2Q8IWU9 490 aa19.85■□□□□ 0.77
ITGB1-215ENST00000488494 NLRP4Q96MN2 994 aa19.85■□□□□ 0.77
ITGB1-215ENST00000488494 GCOM2Q9BZD3 368 aaPredicted RBP19.85■□□□□ 0.77
ITGB1-215ENST00000488494 PPME1Q9Y570 386 aa19.85■□□□□ 0.77
ITGB1-215ENST00000488494 A0A087WZ62 844 aa19.84■□□□□ 0.77
ITGB1-215ENST00000488494 FGFR1P11362 822 aa19.84■□□□□ 0.77
ITGB1-215ENST00000488494 BMPR1AP36894 532 aa19.84■□□□□ 0.77
ITGB1-215ENST00000488494 EMC2Q15006 297 aa19.84■□□□□ 0.77
ITGB1-215ENST00000488494 TIGD5Q53EQ6 642 aa19.84■□□□□ 0.77
ITGB1-215ENST00000488494 XKR9Q5GH70 373 aa19.84■□□□□ 0.77
ITGB1-215ENST00000488494 ZNF410Q86VK4 478 aa19.84■□□□□ 0.77
ITGB1-215ENST00000488494 KSR1Q8IVT5 923 aa19.84■□□□□ 0.77
ITGB1-215ENST00000488494 NEK9Q8TD19 979 aa19.84■□□□□ 0.77
ITGB1-215ENST00000488494 FDXACB1Q9BRP7 624 aaPredicted RBP19.84■□□□□ 0.77
ITGB1-215ENST00000488494 RNF216Q9NWF9 866 aaPredicted RBP19.84■□□□□ 0.77
ITGB1-215ENST00000488494 TMEM161AQ9NX61 479 aa19.84■□□□□ 0.77
ITGB1-215ENST00000488494 ATG2AQ2TAZ0 1938 aa19.83■□□□□ 0.77
ITGB1-215ENST00000488494 TBKBP1A7MCY6 615 aa19.83■□□□□ 0.77
ITGB1-215ENST00000488494 ZBTB39O15060 712 aa19.83■□□□□ 0.77
ITGB1-215ENST00000488494 SLITRK3O94933 977 aa19.83■□□□□ 0.77
ITGB1-215ENST00000488494 CSPG5O95196 566 aa19.83■□□□□ 0.77
ITGB1-215ENST00000488494 TTC38Q5R3I4 469 aa19.83■□□□□ 0.77
ITGB1-215ENST00000488494 OTUD6AQ7L8S5 288 aa19.83■□□□□ 0.77
ITGB1-215ENST00000488494 IL27Q8NEV9 243 aa19.83■□□□□ 0.77
ITGB1-215ENST00000488494 TMEM143Q96AN5 459 aa19.83■□□□□ 0.77
ITGB1-215ENST00000488494 TMX3Q96JJ7 454 aa19.83■□□□□ 0.77
ITGB1-215ENST00000488494 DHX33Q9H6R0 707 aaKnown RBP19.83■□□□□ 0.77
ITGB1-215ENST00000488494 ATP6V0A4Q9HBG4 840 aa19.83■□□□□ 0.77
ITGB1-215ENST00000488494 COL4A3BPQ9Y5P4 624 aa19.83■□□□□ 0.77
ITGB1-215ENST00000488494 GRM6O15303 877 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 RB1P06400 928 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 OR52Z1P0C646 297 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 ZSCAN20P17040 1043 aaPredicted RBP19.82■□□□□ 0.76
ITGB1-215ENST00000488494 SFPQP23246 707 aaKnown RBP eCLIP19.82■□□□□ 0.76
ITGB1-215ENST00000488494 CDC42EP1Q00587 391 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 ZNF174Q15697 407 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 FAM102BQ5T8I3 360 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 EXOC8Q8IYI6 725 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 RNF169Q8NCN4 708 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 PSPC1Q8WXF1 523 aaKnown RBP19.82■□□□□ 0.76
ITGB1-215ENST00000488494 SYMPKQ92797 1274 aaKnown RBP19.82■□□□□ 0.76
ITGB1-215ENST00000488494 HLA-CQ95604 372 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 CCDC43Q96MW1 224 aaKnown RBP19.82■□□□□ 0.76
ITGB1-215ENST00000488494 HSD17B14Q9BPX1 270 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 PLVAPQ9BX97 442 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 HCSTQ9UBK5 93 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 NOL7Q9UMY1 257 aaKnown RBP19.82■□□□□ 0.76
ITGB1-215ENST00000488494 COG5Q9UP83 839 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 TTC28Q96AY4 2481 aa19.82■□□□□ 0.76
ITGB1-215ENST00000488494 FNDC1Q4ZHG4 1894 aaPredicted RBP19.82■□□□□ 0.76
ITGB1-215ENST00000488494 LYPLA2O95372 231 aa19.81■□□□□ 0.76
ITGB1-215ENST00000488494 KCNQ1P51787 676 aa19.81■□□□□ 0.76
ITGB1-215ENST00000488494 FAM189BP81408 668 aa19.81■□□□□ 0.76
ITGB1-215ENST00000488494 ORC2Q13416 577 aaPredicted RBP19.81■□□□□ 0.76
ITGB1-215ENST00000488494 NBR1Q14596 966 aa19.81■□□□□ 0.76
ITGB1-215ENST00000488494 AAK1Q2M2I8 961 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms