RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 RPS6KA5O75582 802 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 AMHP03971 560 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 XRCC6P12956 609 aaKnown RBP eCLIP17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 CDC25AP30304 524 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 PTPAQ15257 358 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 ZNF697Q5TEC3 545 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 RHPN2Q8IUC4 686 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 EXOC8Q8IYI6 725 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 MYOCDQ8IZQ8 938 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 SCLT1Q96NL6 688 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 NACC1Q96RE7 527 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 MTRQ99707 1265 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 SEMA6BQ9H3T3 888 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 ZSCAN16Q9H4T2 348 aaPredicted RBP17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 ATP6V0A4Q9HBG4 840 aa17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 DBR1Q9UK59 544 aaKnown RBP17.84■□□□□ 0.45
ERGIC3-216ENST00000488384 USO1O60763 962 aaKnown RBP17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 DGAT1O75907 488 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 GJB5O95377 273 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 DARSP14868 501 aaKnown RBP17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 PKP1Q13835 747 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 KRT79Q5XKE5 535 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 ZNF410Q86VK4 478 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 KSR1Q8IVT5 923 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 PRPF31Q8WWY3 499 aaKnown RBP17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 NLRP7Q8WX94 980 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 PSPC1Q8WXF1 523 aaKnown RBP17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 USP28Q96RU2 1077 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 CDX2Q99626 313 aaPredicted RBP17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 NKX2-4Q9H2Z4 354 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 MSRAQ9UJ68 235 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 ST3GAL5Q9UNP4 418 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 COL4A3BPQ9Y5P4 624 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 STK24Q9Y6E0 443 aa17.83■□□□□ 0.44
ERGIC3-216ENST00000488384 A0A087WZ62 844 aa17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 MGEA5O60502 916 aa17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 ZSCAN22P10073 491 aaPredicted RBP17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 EIF4BP23588 611 aaKnown RBP17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 GRIN1Q05586 938 aa17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 NFX1Q12986 1120 aaKnown RBP17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 FAM117BQ6P1L5 589 aa17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 RTN4RL1Q86UN2 441 aaPredicted RBP17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 SLC17A8Q8NDX2 589 aa17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 TCP11Q8WWU5 503 aa17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 NLRP4Q96MN2 994 aa17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 FDXACB1Q9BRP7 624 aaPredicted RBP17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 FTHL17Q9BXU8 183 aa17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 TSPYL2Q9H2G4 693 aaPredicted RBP17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 DDX19AQ9NUU7 478 aaKnown RBP17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 CHD7Q9P2D1 2997 aa17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 KIAA1024Q9UPX6 916 aa17.82■□□□□ 0.44
ERGIC3-216ENST00000488384 COL4A6Q14031 1691 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 LCHNA4D1U4 455 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 ENPP3O14638 875 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 GPR182O15218 404 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 TLL1O43897 1013 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 ARHGEF15O94989 841 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 CA3P07451 260 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 CDC42EP1Q00587 391 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 LAMTOR4Q0VGL1 99 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 HYIQ5T013 277 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 FOXD4L5Q5VV16 416 aaPredicted RBP17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 KCNK18Q7Z418 384 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 ASAP3Q8TDY4 903 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 FOXD4L4Q8WXT5 416 aaPredicted RBP17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 TOP1MTQ969P6 601 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 PNMA5Q96PV4 448 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 GCOM2Q9BZD3 368 aaPredicted RBP17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 TTC3P53804 2025 aa17.81■□□□□ 0.44
ERGIC3-216ENST00000488384 ARHGEF35A5YM69 484 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 CSDE1O75534 798 aaKnown RBP17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 F13A1P00488 732 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 PDIA4P13667 645 aaKnown RBP17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 FGFR4P22455 802 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 ARL2P36404 184 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 HTRA4P83105 476 aaPredicted RBP17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 CEBPZQ03701 1054 aaKnown RBP17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 DSC3Q14574 896 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 ODR4Q5SWX8 454 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 PPP2R2DQ66LE6 453 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 PADI6Q6TGC4 694 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 MYLIPQ8WY64 445 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 AK8Q96MA6 479 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 ZBED2Q9BTP6 218 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 POLR3FQ9H1D9 316 aaPredicted RBP17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 BHMT2Q9H2M3 363 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 ZNF576Q9H609 170 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 IFT122Q9HBG6 1241 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 GPRC5CQ9NQ84 441 aa17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 FBXO2Q9UK22 296 aaPredicted RBP17.8■□□□□ 0.44
ERGIC3-216ENST00000488384 PRUNE2Q8WUY3 3088 aa17.79■□□□□ 0.44
ERGIC3-216ENST00000488384 E9PMD0 336 aa17.79■□□□□ 0.44
ERGIC3-216ENST00000488384 MARCKSP29966 332 aaPredicted RBP17.79■□□□□ 0.44
ERGIC3-216ENST00000488384 NASPP49321 788 aaPredicted RBP17.79■□□□□ 0.44
ERGIC3-216ENST00000488384 GRB10Q13322 594 aa17.79■□□□□ 0.44
ERGIC3-216ENST00000488384 TMEM119Q4V9L6 283 aa17.79■□□□□ 0.44
ERGIC3-216ENST00000488384 FAM43BQ6ZT52 329 aaPredicted RBP17.79■□□□□ 0.44
ERGIC3-216ENST00000488384 CRIPAKQ8N1N5 446 aa17.79■□□□□ 0.44
ERGIC3-216ENST00000488384 MCPH1Q8NEM0 835 aa17.79■□□□□ 0.44
ERGIC3-216ENST00000488384 RAD9AQ99638 391 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms