RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 TCTN3Q6NUS6 607 aa6.75□□□□□ -1.33
VPS8-224ENST00000488255 USP7Q93009 1102 aa6.75□□□□□ -1.33
VPS8-224ENST00000488255 OR14A2Q96R54 314 aa6.75□□□□□ -1.33
VPS8-224ENST00000488255 MTG2Q9H4K7 406 aa6.75□□□□□ -1.33
VPS8-224ENST00000488255 KCMF1Q9P0J7 381 aa6.75□□□□□ -1.33
VPS8-224ENST00000488255 MSRAQ9UJ68 235 aa6.75□□□□□ -1.33
VPS8-224ENST00000488255 CNOT11Q9UKZ1 510 aaKnown RBP6.75□□□□□ -1.33
VPS8-224ENST00000488255 OAZ3Q9UMX2 235 aa6.75□□□□□ -1.33
VPS8-224ENST00000488255 FOXS1O43638 330 aa6.74□□□□□ -1.33
VPS8-224ENST00000488255 ADRB1P08588 477 aa6.74□□□□□ -1.33
VPS8-224ENST00000488255 CR2P20023 1033 aa6.74□□□□□ -1.33
VPS8-224ENST00000488255 ID4P47928 161 aa6.74□□□□□ -1.33
VPS8-224ENST00000488255 LSSP48449 732 aa6.74□□□□□ -1.33
VPS8-224ENST00000488255 KLHDC10Q6PID8 442 aa6.74□□□□□ -1.33
VPS8-224ENST00000488255 DDX46Q7L014 1031 aaKnown RBP6.74□□□□□ -1.33
VPS8-224ENST00000488255 THNSL2Q86YJ6 484 aa6.74□□□□□ -1.33
VPS8-224ENST00000488255 DYDC2Q96IM9 177 aa6.74□□□□□ -1.33
VPS8-224ENST00000488255 ZNF496Q96IT1 587 aaPredicted RBP6.74□□□□□ -1.33
VPS8-224ENST00000488255 GPR20Q99678 358 aa6.74□□□□□ -1.33
VPS8-224ENST00000488255 ZFR2Q9UPR6 939 aaKnown RBP6.74□□□□□ -1.33
VPS8-224ENST00000488255 MAPRE3Q9UPY8 281 aa6.74□□□□□ -1.33
VPS8-224ENST00000488255 RBM8AQ9Y5S9 174 aaKnown RBP6.74□□□□□ -1.33
VPS8-224ENST00000488255 MATN2O00339 956 aa6.73□□□□□ -1.33
VPS8-224ENST00000488255 ZNF623O75123 536 aa6.73□□□□□ -1.33
VPS8-224ENST00000488255 RAB11FIP3O75154 756 aa6.73□□□□□ -1.33
VPS8-224ENST00000488255 H2AFYO75367 372 aaKnown RBP6.73□□□□□ -1.33
VPS8-224ENST00000488255 PCDH8O95206 1070 aa6.73□□□□□ -1.33
VPS8-224ENST00000488255 BCAR1P56945 870 aa6.73□□□□□ -1.33
VPS8-224ENST00000488255 ADAM17P78536 824 aa6.73□□□□□ -1.33
VPS8-224ENST00000488255 ATP2C1P98194 919 aaPredicted RBP6.73□□□□□ -1.33
VPS8-224ENST00000488255 ATP13A4Q4VNC1 1196 aa6.73□□□□□ -1.33
VPS8-224ENST00000488255 CT47A1Q5JQC4 288 aaPredicted RBP6.73□□□□□ -1.33
VPS8-224ENST00000488255 PALM2Q8IXS6 379 aa6.73□□□□□ -1.33
VPS8-224ENST00000488255 GCDHQ92947 438 aaPredicted RBP6.73□□□□□ -1.33
VPS8-224ENST00000488255 FERMT2Q96AC1 680 aa6.73□□□□□ -1.33
VPS8-224ENST00000488255 NOL10Q9BSC4 688 aaKnown RBP6.73□□□□□ -1.33
VPS8-224ENST00000488255 EMC7Q9NPA0 242 aa6.73□□□□□ -1.33
VPS8-224ENST00000488255 GOLGA8BA8MQT2 603 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 ELL2O00472 640 aaPredicted RBP6.72□□□□□ -1.33
VPS8-224ENST00000488255 HNRNPLP14866 589 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS8-224ENST00000488255 LSP1P33241 339 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 MASP1P48740 699 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 NFKB2Q00653 900 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 LRRC32Q14392 662 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 DDB1Q16531 1140 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 BROXQ5VW32 411 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 KIAA1841Q6NSI8 718 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 ESPNLQ6ZVH7 1005 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 HDGFL2Q7Z4V5 671 aaPredicted RBP6.72□□□□□ -1.33
VPS8-224ENST00000488255 STRA8Q7Z7C7 330 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 RNF180Q86T96 592 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 FUKQ8N0W3 1084 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 Q8TCH9 128 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 CFHR4Q92496 578 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 TMEM176AQ96HP8 235 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 RPL10LQ96L21 214 aaKnown RBP6.72□□□□□ -1.33
VPS8-224ENST00000488255 PLA2G12BQ9BX93 195 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 ANO3Q9BYT9 981 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 POLR3BQ9NW08 1133 aaPredicted RBP6.72□□□□□ -1.33
VPS8-224ENST00000488255 USP18Q9UMW8 372 aa6.72□□□□□ -1.33
VPS8-224ENST00000488255 ST20-MTHFSA0A0A6YYL1 179 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 PATE3B3GLJ2 98 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 NEMP1O14524 444 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 MAFO75444 373 aaPredicted RBP6.71□□□□□ -1.34
VPS8-224ENST00000488255 INSRRP14616 1297 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 ZNF20P17024 532 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 CNGA1P29973 690 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 NFYCQ13952 458 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 TERF2Q15554 542 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 KANSL1Q7Z3B3 1105 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 TTC9BQ8N6N2 239 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 DNERQ8NFT8 737 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 CHAC2Q8WUX2 184 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 SLC5A5Q92911 643 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 GFM2Q969S9 779 aaKnown RBP6.71□□□□□ -1.34
VPS8-224ENST00000488255 WDR92Q96MX6 357 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 KRTAP4-7Q9BYR0 210 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 KLC2Q9H0B6 622 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 SYNPO2Q9UMS6 1093 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 NOC2LQ9Y3T9 749 aaKnown RBP6.71□□□□□ -1.34
VPS8-224ENST00000488255 TCAF1Q9Y4C2 921 aa6.71□□□□□ -1.34
VPS8-224ENST00000488255 C2orf78A6NCI8 922 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 CLEC2LP0C7M8 214 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 SOX5P35711 763 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 SESN2P58004 480 aaPredicted RBP6.7□□□□□ -1.34
VPS8-224ENST00000488255 BPIFB4P59827 614 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 KRTAP10-2P60368 255 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 HGFACQ04756 655 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 ZBTB41Q5SVQ8 909 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 BMP8AQ7Z5Y6 402 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 ANKRD53Q8N9V6 530 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 ZNF610Q8N9Z0 462 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 SHCBP1Q8NEM2 672 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 DVL3Q92997 716 aaPredicted RBP6.7□□□□□ -1.34
VPS8-224ENST00000488255 WWC2-AS2Q96NR7 200 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 TTC1Q99614 292 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 CAAP1Q9H8G2 361 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 CD248Q9HCU0 757 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 VWA7Q9Y334 891 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 CTDP1Q9Y5B0 961 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms