RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 RDM1Q8NG50 284 aa22.79■■□□□ 1.24
TRIM8-204ENST00000487927 SPPL3Q8TCT6 385 aa22.79■■□□□ 1.24
TRIM8-204ENST00000487927 GJB4Q9NTQ9 266 aa22.79■■□□□ 1.24
TRIM8-204ENST00000487927 PCDHB7Q9Y5E2 793 aa22.79■■□□□ 1.24
TRIM8-204ENST00000487927 STK36Q9NRP7 1315 aa22.79■■□□□ 1.24
TRIM8-204ENST00000487927 GRXCR2A6NFK2 248 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 SLC37A4O43826 429 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 CDKL5O76039 1030 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 CSPG5O95196 566 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 CTDNEP1O95476 244 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 TMOD1P28289 359 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 FAM189BP81408 668 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 CTC1Q2NKJ3 1217 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 NAALADL2Q58DX5 795 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 FAM102BQ5T8I3 360 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 FAM178BQ8IXR5 827 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 KLHL23Q8NBE8 558 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 ZNF668Q96K58 619 aaPredicted RBP22.78■■□□□ 1.24
TRIM8-204ENST00000487927 CEP89Q96ST8 783 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 MAP7D2Q96T17 732 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 LLPHQ9BRT6 129 aaKnown RBP22.78■■□□□ 1.24
TRIM8-204ENST00000487927 EPHX3Q9H6B9 360 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 CLDND1Q9NY35 253 aa22.78■■□□□ 1.24
TRIM8-204ENST00000487927 TMEM150BA6NC51 233 aa22.77■■□□□ 1.24
TRIM8-204ENST00000487927 GTF2F1P35269 517 aaKnown RBP eCLIP22.77■■□□□ 1.245e-7■■□□□ 14.4
TRIM8-204ENST00000487927 EP400NLQ6ZTU2 488 aa22.77■■□□□ 1.24
TRIM8-204ENST00000487927 HCSTQ9UBK5 93 aa22.77■■□□□ 1.24
TRIM8-204ENST00000487927 DDX25Q9UHL0 483 aaKnown RBP22.77■■□□□ 1.24
TRIM8-204ENST00000487927 TBKBP1A7MCY6 615 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 GOLGA6L22H0YM25 854 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 COL9A1P20849 921 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 PDCP20941 246 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 IRS1P35568 1242 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 GPC3P51654 580 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 TBC1D8BQ0IIM8 1120 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 DRP2Q13474 957 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 NBR1Q14596 966 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 PUS10Q3MIT2 529 aaKnown RBP22.76■■□□□ 1.23
TRIM8-204ENST00000487927 XKR3Q5GH77 459 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 OXER1Q8TDS5 423 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 GTF3C6Q969F1 213 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 NIFKQ9BYG3 293 aaKnown RBP22.76■■□□□ 1.23
TRIM8-204ENST00000487927 TMEM161AQ9NX61 479 aa22.76■■□□□ 1.23
TRIM8-204ENST00000487927 NCK2O43639 380 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 LARGE1O95461 756 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 BRD1O95696 1058 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 FGFR1P11362 822 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 EIF4BP23588 611 aaKnown RBP22.75■■□□□ 1.23
TRIM8-204ENST00000487927 MCM4P33991 863 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 DLX2Q07687 328 aaPredicted RBP22.75■■□□□ 1.23
TRIM8-204ENST00000487927 LETM2Q2VYF4 491 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 MTERF2Q49AM1 385 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 CCDC83Q8IWF9 413 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 ZNF710Q8N1W2 664 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 POF1BQ8WVV4 589 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 SH2D3AQ9BRG2 576 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 ELAC1Q9H777 363 aaKnown RBP22.75■■□□□ 1.23
TRIM8-204ENST00000487927 RNF19AQ9NV58 838 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 SEPT9Q9UHD8 586 aaPredicted RBP22.75■■□□□ 1.23
TRIM8-204ENST00000487927 KIF3AQ9Y496 699 aa22.75■■□□□ 1.23
TRIM8-204ENST00000487927 IGKV6-21A0A0C4DH24 114 aa22.74■■□□□ 1.23
TRIM8-204ENST00000487927 CCDC194A0A1B0GVG4 234 aa22.74■■□□□ 1.23
TRIM8-204ENST00000487927 EML1O00423 815 aa22.74■■□□□ 1.23
TRIM8-204ENST00000487927 LINC01565O15544 149 aa22.74■■□□□ 1.23
TRIM8-204ENST00000487927 DARSP14868 501 aaKnown RBP22.74■■□□□ 1.23
TRIM8-204ENST00000487927 EARS2Q5JPH6 523 aaKnown RBP22.74■■□□□ 1.23
TRIM8-204ENST00000487927 ADGRD2Q7Z7M1 963 aa22.74■■□□□ 1.23
TRIM8-204ENST00000487927 NEK8Q86SG6 692 aa22.74■■□□□ 1.23
TRIM8-204ENST00000487927 C1QTNF1Q9BXJ1 281 aa22.74■■□□□ 1.23
TRIM8-204ENST00000487927 CWH43Q9H720 699 aa22.74■■□□□ 1.23
TRIM8-204ENST00000487927 ATP6V0A4Q9HBG4 840 aa22.74■■□□□ 1.23
TRIM8-204ENST00000487927 KCNMB3Q9NPA1 279 aa22.74■■□□□ 1.23
TRIM8-204ENST00000487927 RNF216Q9NWF9 866 aaPredicted RBP22.74■■□□□ 1.23
TRIM8-204ENST00000487927 RAPGEFL1Q9UHV5 662 aa22.74■■□□□ 1.23
TRIM8-204ENST00000487927 VAV3Q9UKW4 847 aa22.74■■□□□ 1.23
TRIM8-204ENST00000487927 FDPSP14324 419 aaKnown RBP22.73■■□□□ 1.23
TRIM8-204ENST00000487927 FGFR4P22455 802 aa22.73■■□□□ 1.23
TRIM8-204ENST00000487927 PPP4R3AQ6IN85 833 aa22.73■■□□□ 1.23
TRIM8-204ENST00000487927 GJD3Q8N144 294 aa22.73■■□□□ 1.23
TRIM8-204ENST00000487927 IGFLR1Q9H665 355 aa22.73■■□□□ 1.23
TRIM8-204ENST00000487927 TYW1Q9NV66 732 aaKnown RBP22.73■■□□□ 1.23
TRIM8-204ENST00000487927 PCDHGC5Q9Y5F6 944 aa22.73■■□□□ 1.23
TRIM8-204ENST00000487927 TBX10O75333 385 aa22.72■■□□□ 1.23
TRIM8-204ENST00000487927 XBP1P17861 261 aa22.72■■□□□ 1.23
TRIM8-204ENST00000487927 HMGN5P82970 282 aaKnown RBP22.72■■□□□ 1.23
TRIM8-204ENST00000487927 PPP2R5CQ13362 524 aa22.72■■□□□ 1.23
TRIM8-204ENST00000487927 ADAM15Q13444 863 aa22.72■■□□□ 1.23
TRIM8-204ENST00000487927 PIK3AP1Q6ZUJ8 805 aa22.72■■□□□ 1.23
TRIM8-204ENST00000487927 ANO5Q75V66 913 aa22.72■■□□□ 1.23
TRIM8-204ENST00000487927 COLGALT1Q8NBJ5 622 aa22.72■■□□□ 1.23
TRIM8-204ENST00000487927 ORC3Q9UBD5 711 aaPredicted RBP22.72■■□□□ 1.23
TRIM8-204ENST00000487927 FAM205CA6NFA0 338 aa22.71■■□□□ 1.23
TRIM8-204ENST00000487927 CSDE1O75534 798 aaKnown RBP22.71■■□□□ 1.23
TRIM8-204ENST00000487927 GCFC2P16383 781 aaKnown RBP22.71■■□□□ 1.23
TRIM8-204ENST00000487927 PSMC5P62195 406 aa22.71■■□□□ 1.23
TRIM8-204ENST00000487927 CLUL1Q15846 466 aa22.71■■□□□ 1.23
TRIM8-204ENST00000487927 SPOUT1Q5T280 376 aaKnown RBP22.71■■□□□ 1.23
TRIM8-204ENST00000487927 LRRC55Q6ZSA7 311 aa22.71■■□□□ 1.23
TRIM8-204ENST00000487927 ECHDC2Q86YB7 292 aa22.71■■□□□ 1.23
TRIM8-204ENST00000487927 NECAB1Q8N987 351 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms