RNA–Protein interactions for RNA: ENST00000487897.5

PRKCD-206, Transcript of protein kinase C delta, humanhuman

TSL 4

Gene PRKCD, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-206ENST00000487897 SLC17A8Q8NDX2 589 aa18.9■□□□□ 0.62
PRKCD-206ENST00000487897 RGS18Q9NS28 235 aa18.9■□□□□ 0.62
PRKCD-206ENST00000487897 C1orf112Q9NSG2 853 aa18.9■□□□□ 0.62
PRKCD-206ENST00000487897 ANKEF1Q9NU02 776 aa18.9■□□□□ 0.62
PRKCD-206ENST00000487897 RNF216Q9NWF9 866 aaPredicted RBP18.9■□□□□ 0.62
PRKCD-206ENST00000487897 MTUS1Q9ULD2 1270 aa18.9■□□□□ 0.62
PRKCD-206ENST00000487897 XRCC6P12956 609 aaKnown RBP eCLIP18.89■□□□□ 0.61
PRKCD-206ENST00000487897 SARSP49591 514 aaKnown RBP18.89■□□□□ 0.61
PRKCD-206ENST00000487897 SLC24A5Q71RS6 500 aa18.89■□□□□ 0.61
PRKCD-206ENST00000487897 ZNF410Q86VK4 478 aa18.89■□□□□ 0.61
PRKCD-206ENST00000487897 RHPN2Q8IUC4 686 aa18.89■□□□□ 0.61
PRKCD-206ENST00000487897 ZNF689Q96CS4 500 aaPredicted RBP18.89■□□□□ 0.61
PRKCD-206ENST00000487897 SAMD11Q96NU1 681 aa18.89■□□□□ 0.61
PRKCD-206ENST00000487897 C17orf80Q9BSJ5 609 aa18.89■□□□□ 0.61
PRKCD-206ENST00000487897 GCOM2Q9BZD3 368 aaPredicted RBP18.89■□□□□ 0.61
PRKCD-206ENST00000487897 RC3H2Q9HBD1 1191 aaKnown RBP18.89■□□□□ 0.61
PRKCD-206ENST00000487897 TUFT1Q9NNX1 390 aa18.89■□□□□ 0.61
PRKCD-206ENST00000487897 PCDHB6Q9Y5E3 794 aa18.89■□□□□ 0.61
PRKCD-206ENST00000487897 TTC3P53804 2025 aa18.89■□□□□ 0.61
PRKCD-206ENST00000487897 COL6A3P12111 3177 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 A0A087WZ62 844 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 GTPBP6O43824 516 aaPredicted RBP18.88■□□□□ 0.61
PRKCD-206ENST00000487897 GAS2O43903 313 aaKnown RBP18.88■□□□□ 0.61
PRKCD-206ENST00000487897 LPXNO60711 386 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 SPATA31C1P0DKV0 1188 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 PTGDRQ13258 359 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 GRB10Q13322 594 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 DSC3Q14574 896 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 EMC2Q15006 297 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 RILPL1Q5EBL4 403 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 CATSPER3Q86XQ3 398 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 FIBCD1Q8N539 461 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 ERMNQ8TAM6 284 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 TCP11Q8WWU5 503 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 TMEM143Q96AN5 459 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 FDXACB1Q9BRP7 624 aaPredicted RBP18.88■□□□□ 0.61
PRKCD-206ENST00000487897 POLR3CQ9BUI4 534 aaPredicted RBP18.88■□□□□ 0.61
PRKCD-206ENST00000487897 INO80BQ9C086 356 aaPredicted RBP18.88■□□□□ 0.61
PRKCD-206ENST00000487897 LRFN2Q9ULH4 789 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 PCDHB7Q9Y5E2 793 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 MTCH2Q9Y6C9 303 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 ADGRA3Q8IWK6 1321 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 LOXHD1Q8IVV2 1947 aa18.88■□□□□ 0.61
PRKCD-206ENST00000487897 C9IYK1 514 aa18.87■□□□□ 0.61
PRKCD-206ENST00000487897 LAD1O00515 517 aa18.87■□□□□ 0.61
PRKCD-206ENST00000487897 ZSCAN20P17040 1043 aaPredicted RBP18.87■□□□□ 0.61
PRKCD-206ENST00000487897 FXR2P51116 673 aaKnown RBP eCLIP18.87■□□□□ 0.61
PRKCD-206ENST00000487897 FAM189BP81408 668 aa18.87■□□□□ 0.61
PRKCD-206ENST00000487897 COL4A6Q14031 1691 aa18.87■□□□□ 0.61
PRKCD-206ENST00000487897 BTG3Q14201 252 aaPredicted RBP18.87■□□□□ 0.61
PRKCD-206ENST00000487897 PDIA5Q14554 519 aa18.87■□□□□ 0.61
PRKCD-206ENST00000487897 EPC2Q52LR7 807 aa18.87■□□□□ 0.61
PRKCD-206ENST00000487897 KSR1Q8IVT5 923 aa18.87■□□□□ 0.61
PRKCD-206ENST00000487897 TMEM192Q8IY95 271 aa18.87■□□□□ 0.61
PRKCD-206ENST00000487897 FBXO22Q8NEZ5 403 aa18.87■□□□□ 0.61
PRKCD-206ENST00000487897 PIGOQ8TEQ8 1089 aa18.87■□□□□ 0.61
PRKCD-206ENST00000487897 PRPF31Q8WWY3 499 aaKnown RBP18.87■□□□□ 0.61
PRKCD-206ENST00000487897 PSPC1Q8WXF1 523 aaKnown RBP18.87■□□□□ 0.61
PRKCD-206ENST00000487897 PPM1EQ8WY54 764 aa18.87■□□□□ 0.61
PRKCD-206ENST00000487897 COL4A3BPQ9Y5P4 624 aa18.87■□□□□ 0.61
PRKCD-206ENST00000487897 ASAP2O43150 1006 aa18.86■□□□□ 0.61
PRKCD-206ENST00000487897 MED24O75448 989 aa18.86■□□□□ 0.61
PRKCD-206ENST00000487897 CSDE1O75534 798 aaKnown RBP18.86■□□□□ 0.61
PRKCD-206ENST00000487897 DGAT1O75907 488 aa18.86■□□□□ 0.61
PRKCD-206ENST00000487897 RPA1P27694 616 aa18.86■□□□□ 0.61
PRKCD-206ENST00000487897 RARRES1P49788 294 aa18.86■□□□□ 0.61
PRKCD-206ENST00000487897 CCDC85BQ15834 202 aaPredicted RBP18.86■□□□□ 0.61
PRKCD-206ENST00000487897 CMTR2Q8IYT2 770 aaKnown RBP18.86■□□□□ 0.61
PRKCD-206ENST00000487897 NLRP4Q96MN2 994 aa18.86■□□□□ 0.61
PRKCD-206ENST00000487897 CCDC43Q96MW1 224 aaKnown RBP18.86■□□□□ 0.61
PRKCD-206ENST00000487897 NACC1Q96RE7 527 aa18.86■□□□□ 0.61
PRKCD-206ENST00000487897 MTRQ99707 1265 aa18.86■□□□□ 0.61
PRKCD-206ENST00000487897 ELAC1Q9H777 363 aaKnown RBP18.86■□□□□ 0.61
PRKCD-206ENST00000487897 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.86■□□□□ 0.61
PRKCD-206ENST00000487897 BMP2KQ9NSY1 1161 aaPredicted RBP18.86■□□□□ 0.61
PRKCD-206ENST00000487897 LMCD1Q9NZU5 365 aa18.86■□□□□ 0.61
PRKCD-206ENST00000487897 A0A087WWV3 80 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 IBSPP21815 317 aaPredicted RBP18.85■□□□□ 0.61
PRKCD-206ENST00000487897 FGFR4P22455 802 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 SFPQP23246 707 aaKnown RBP eCLIP18.85■□□□□ 0.61
PRKCD-206ENST00000487897 PRPHP41219 470 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 LAMTOR4Q0VGL1 99 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 HAUS3Q68CZ6 603 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.85■□□□□ 0.61
PRKCD-206ENST00000487897 GDPD5Q8WTR4 605 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 CLP1Q92989 425 aaKnown RBP18.85■□□□□ 0.61
PRKCD-206ENST00000487897 RAB34Q9BZG1 259 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 ATP6V0A4Q9HBG4 840 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 IFT122Q9HBG6 1241 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 XPNPEP1Q9NQW7 623 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 CHST12Q9NRB3 414 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 TMEM161AQ9NX61 479 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 LRWD1Q9UFC0 647 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 DBR1Q9UK59 544 aaKnown RBP18.85■□□□□ 0.61
PRKCD-206ENST00000487897 RWDD3Q9Y3V2 267 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 CHD7Q9P2D1 2997 aa18.85■□□□□ 0.61
PRKCD-206ENST00000487897 SRGAP2CP0DJJ0 459 aa18.84■□□□□ 0.61
PRKCD-206ENST00000487897 PDCP20941 246 aa18.84■□□□□ 0.61
PRKCD-206ENST00000487897 MUTP22033 750 aa18.84■□□□□ 0.61
PRKCD-206ENST00000487897 BMPR1AP36894 532 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms