RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 SPECC1Q5M775 1068 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 OTUD6AQ7L8S5 288 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 CABP7Q86V35 215 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 GDPD5Q8WTR4 605 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 LEO1Q8WVC0 666 aaPredicted RBP11.93□□□□□ -0.5
TOP3B-216ENST00000487485 LMBR1Q8WVP7 490 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 TRAPPC12Q8WVT3 735 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 EPSTI1Q96J88 318 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 NACC1Q96RE7 527 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 SH2D3AQ9BRG2 576 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 NIFKQ9BYG3 293 aaKnown RBP11.93□□□□□ -0.5
TOP3B-216ENST00000487485 PCDHA7Q9UN72 937 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 KIAA1024Q9UPX6 916 aa11.93□□□□□ -0.5
TOP3B-216ENST00000487485 COL1A2P08123 1366 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 ZBTB42B2RXF5 422 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 TREHO43280 583 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 CUTAO60888 179 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 XRCC6P12956 609 aaKnown RBP eCLIP11.92□□□□□ -0.5
TOP3B-216ENST00000487485 ADAM17P78536 824 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 ZRSR1Q15695 479 aaKnown RBP11.92□□□□□ -0.5
TOP3B-216ENST00000487485 MTERF2Q49AM1 385 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 MARCH8Q5T0T0 291 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 PLA2G4FQ68DD2 849 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 POTEGQ6S5H5 508 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 USP49Q70CQ1 688 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
TOP3B-216ENST00000487485 PIGOQ8TEQ8 1089 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 CEP170P1Q96L14 293 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 CCSER1Q9C0I3 900 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 ANKEF1Q9NU02 776 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 DDX19AQ9NUU7 478 aaKnown RBP11.92□□□□□ -0.5
TOP3B-216ENST00000487485 NOD1Q9Y239 953 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 PTPRSQ13332 1948 aa11.92□□□□□ -0.5
TOP3B-216ENST00000487485 KLRC1P26715 233 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 NPEPPSP55786 919 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 PTK7Q13308 1070 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 BFSP2Q13515 415 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 TARBP2Q15633 366 aaKnown RBP11.91□□□□□ -0.5
TOP3B-216ENST00000487485 XKR9Q5GH70 373 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 HYIQ5T013 277 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 AXDND1Q5T1B0 1012 aaPredicted RBP11.91□□□□□ -0.5
TOP3B-216ENST00000487485 MTHFD1LQ6UB35 978 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 ZBTB10Q96DT7 871 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 CALML4Q96GE6 196 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 CDK5RAP3Q96JB5 506 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 PNMA5Q96PV4 448 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 CTAGE1Q96RT6 745 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 PLIN2Q99541 437 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 NT5C3AQ9H0P0 336 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 SUGCTQ9HAC7 445 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 GDPD2Q9HCC8 539 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 CYP26B1Q9NR63 512 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 LMCD1Q9NZU5 365 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 TUBE1Q9UJT0 475 aa11.91□□□□□ -0.5
TOP3B-216ENST00000487485 KDM3AQ9Y4C1 1321 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.9□□□□□ -0.5
TOP3B-216ENST00000487485 MBLAC1A4D2B0 266 aaPredicted RBP11.9□□□□□ -0.5
TOP3B-216ENST00000487485 E9PMD0 336 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 SLC26A4O43511 780 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 BAIAP3O94812 1187 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 TXLNAP40222 546 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 KCNJ6P48051 423 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 WDR5P61964 334 aaKnown RBP11.9□□□□□ -0.5
TOP3B-216ENST00000487485 DEFB103AP81534 67 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 KARSQ15046 597 aaKnown RBP11.9□□□□□ -0.5
TOP3B-216ENST00000487485 TCTN1Q2MV58 587 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 ADALQ6DHV7 355 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 SHC4Q6S5L8 630 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 SERINC5Q86VE9 423 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 FAM178BQ8IXR5 827 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 GJD3Q8N144 294 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 KCTD17Q8N5Z5 321 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 RASSF8Q8NHQ8 419 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.9□□□□□ -0.5
TOP3B-216ENST00000487485 CCDC43Q96MW1 224 aaKnown RBP11.9□□□□□ -0.5
TOP3B-216ENST00000487485 CEP89Q96ST8 783 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 ZBED2Q9BTP6 218 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 UBE2ZQ9H832 354 aaPredicted RBP11.9□□□□□ -0.5
TOP3B-216ENST00000487485 CCDC39Q9UFE4 941 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 DBR1Q9UK59 544 aaKnown RBP11.9□□□□□ -0.5
TOP3B-216ENST00000487485 MTUS1Q9ULD2 1270 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 DNM3Q9UQ16 869 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 PCDHA2Q9Y5H9 948 aa11.9□□□□□ -0.5
TOP3B-216ENST00000487485 TRIOO75962 3097 aa11.9□□□□□ -0.51
TOP3B-216ENST00000487485 WDFY4Q6ZS81 3184 aa11.89□□□□□ -0.51
TOP3B-216ENST00000487485 MAGEB2O15479 319 aa11.89□□□□□ -0.51
TOP3B-216ENST00000487485 MAFO75444 373 aaPredicted RBP11.89□□□□□ -0.51
TOP3B-216ENST00000487485 C22orf31O95567 290 aa11.89□□□□□ -0.51
TOP3B-216ENST00000487485 RARRES1P49788 294 aa11.89□□□□□ -0.51
TOP3B-216ENST00000487485 TBC1D8BQ0IIM8 1120 aa11.89□□□□□ -0.51
TOP3B-216ENST00000487485 TMEM119Q4V9L6 283 aa11.89□□□□□ -0.51
TOP3B-216ENST00000487485 EFCAB12Q6NXP0 572 aa11.89□□□□□ -0.51
TOP3B-216ENST00000487485 RUFY4Q6ZNE9 571 aa11.89□□□□□ -0.51
TOP3B-216ENST00000487485 KCNK18Q7Z418 384 aa11.89□□□□□ -0.51
TOP3B-216ENST00000487485 EXOC8Q8IYI6 725 aa11.89□□□□□ -0.51
TOP3B-216ENST00000487485 METTL13Q8N6R0 699 aa11.89□□□□□ -0.51
TOP3B-216ENST00000487485 DHX38Q92620 1227 aaKnown RBP11.89□□□□□ -0.51
TOP3B-216ENST00000487485 PANK2Q9BZ23 570 aa11.89□□□□□ -0.51
TOP3B-216ENST00000487485 PPME1Q9Y570 386 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms