RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 EMC2Q15006 297 aa25.01■■□□□ 1.59
CDHR3-212ENST00000487084 CCDC85BQ15834 202 aaPredicted RBP25.01■■□□□ 1.59
CDHR3-212ENST00000487084 LARP1BQ659C4 914 aaKnown RBP25.01■■□□□ 1.59
CDHR3-212ENST00000487084 NPAS4Q8IUM7 802 aa25.01■■□□□ 1.59
CDHR3-212ENST00000487084 EXOC8Q8IYI6 725 aa25.01■■□□□ 1.59
CDHR3-212ENST00000487084 TMEM143Q96AN5 459 aa25.01■■□□□ 1.59
CDHR3-212ENST00000487084 NLRP4Q96MN2 994 aa25.01■■□□□ 1.59
CDHR3-212ENST00000487084 C17orf80Q9BSJ5 609 aa25.01■■□□□ 1.59
CDHR3-212ENST00000487084 GCOM2Q9BZD3 368 aaPredicted RBP25.01■■□□□ 1.59
CDHR3-212ENST00000487084 CHD7Q9P2D1 2997 aa25.01■■□□□ 1.59
CDHR3-212ENST00000487084 A0A087WZ62 844 aa25■■□□□ 1.59
CDHR3-212ENST00000487084 GTPBP6O43824 516 aaPredicted RBP25■■□□□ 1.59
CDHR3-212ENST00000487084 STAG3L1P0CL83 205 aa25■■□□□ 1.59
CDHR3-212ENST00000487084 FGFR4P22455 802 aa25■■□□□ 1.59
CDHR3-212ENST00000487084 CDC42EP1Q00587 391 aa25■■□□□ 1.59
CDHR3-212ENST00000487084 FIBCD1Q8N539 461 aa25■■□□□ 1.59
CDHR3-212ENST00000487084 ERMNQ8TAM6 284 aa25■■□□□ 1.59
CDHR3-212ENST00000487084 FDXACB1Q9BRP7 624 aaPredicted RBP25■■□□□ 1.59
CDHR3-212ENST00000487084 DHX33Q9H6R0 707 aaKnown RBP25■■□□□ 1.59
CDHR3-212ENST00000487084 ADGRA3Q8IWK6 1321 aa25■■□□□ 1.59
CDHR3-212ENST00000487084 CSDE1O75534 798 aaKnown RBP24.99■■□□□ 1.59
CDHR3-212ENST00000487084 LYPLA2O95372 231 aa24.99■■□□□ 1.59
CDHR3-212ENST00000487084 SARSP49591 514 aaKnown RBP24.99■■□□□ 1.59
CDHR3-212ENST00000487084 GRB10Q13322 594 aa24.99■■□□□ 1.59
CDHR3-212ENST00000487084 KSR1Q8IVT5 923 aa24.99■■□□□ 1.59
CDHR3-212ENST00000487084 FBXO22Q8NEZ5 403 aa24.99■■□□□ 1.59
CDHR3-212ENST00000487084 PIGOQ8TEQ8 1089 aa24.99■■□□□ 1.59
CDHR3-212ENST00000487084 RGS18Q9NS28 235 aa24.99■■□□□ 1.59
CDHR3-212ENST00000487084 C1orf112Q9NSG2 853 aa24.99■■□□□ 1.59
CDHR3-212ENST00000487084 A0A087WWV3 80 aa24.98■■□□□ 1.59
CDHR3-212ENST00000487084 ZSCAN20P17040 1043 aaPredicted RBP24.98■■□□□ 1.59
CDHR3-212ENST00000487084 PTGDRQ13258 359 aa24.98■■□□□ 1.59
CDHR3-212ENST00000487084 CUL4AQ13619 759 aa24.98■■□□□ 1.59
CDHR3-212ENST00000487084 BTG3Q14201 252 aaPredicted RBP24.98■■□□□ 1.59
CDHR3-212ENST00000487084 ZNF410Q86VK4 478 aa24.98■■□□□ 1.59
CDHR3-212ENST00000487084 C4orf32Q8N8J7 132 aa24.98■■□□□ 1.59
CDHR3-212ENST00000487084 PSPC1Q8WXF1 523 aaKnown RBP24.98■■□□□ 1.59
CDHR3-212ENST00000487084 MTRQ99707 1265 aa24.98■■□□□ 1.59
CDHR3-212ENST00000487084 PCDHB7Q9Y5E2 793 aa24.98■■□□□ 1.59
CDHR3-212ENST00000487084 COL4A3BPQ9Y5P4 624 aa24.98■■□□□ 1.59
CDHR3-212ENST00000487084 TTC3P53804 2025 aa24.98■■□□□ 1.59
CDHR3-212ENST00000487084 MED24O75448 989 aa24.97■■□□□ 1.59
CDHR3-212ENST00000487084 DGKIO75912 1065 aa24.97■■□□□ 1.59
CDHR3-212ENST00000487084 SPATA31C1P0DKV0 1188 aa24.97■■□□□ 1.59
CDHR3-212ENST00000487084 PAN2Q504Q3 1202 aaKnown RBP24.97■■□□□ 1.59
CDHR3-212ENST00000487084 RILPL1Q5EBL4 403 aa24.97■■□□□ 1.59
CDHR3-212ENST00000487084 FAM43BQ6ZT52 329 aaPredicted RBP24.97■■□□□ 1.59
CDHR3-212ENST00000487084 SLC24A5Q71RS6 500 aa24.97■■□□□ 1.59
CDHR3-212ENST00000487084 CATSPER3Q86XQ3 398 aa24.97■■□□□ 1.59
CDHR3-212ENST00000487084 RC3H2Q9HBD1 1191 aaKnown RBP24.97■■□□□ 1.59
CDHR3-212ENST00000487084 TUFT1Q9NNX1 390 aa24.97■■□□□ 1.59
CDHR3-212ENST00000487084 ANKEF1Q9NU02 776 aa24.97■■□□□ 1.59
CDHR3-212ENST00000487084 GAS2O43903 313 aaKnown RBP24.96■■□□□ 1.59
CDHR3-212ENST00000487084 SFPQP23246 707 aaKnown RBP eCLIP24.96■■□□□ 1.596e-7■■□□□ 12.2
CDHR3-212ENST00000487084 DSC3Q14574 896 aa24.96■■□□□ 1.59
CDHR3-212ENST00000487084 EPC2Q52LR7 807 aa24.96■■□□□ 1.59
CDHR3-212ENST00000487084 HAUS3Q68CZ6 603 aa24.96■■□□□ 1.59
CDHR3-212ENST00000487084 TCP11Q8WWU5 503 aa24.96■■□□□ 1.59
CDHR3-212ENST00000487084 PRPF31Q8WWY3 499 aaKnown RBP24.96■■□□□ 1.59
CDHR3-212ENST00000487084 ZNF689Q96CS4 500 aaPredicted RBP24.96■■□□□ 1.59
CDHR3-212ENST00000487084 SAMD11Q96NU1 681 aa24.96■■□□□ 1.59
CDHR3-212ENST00000487084 ATP6V0A4Q9HBG4 840 aa24.96■■□□□ 1.59
CDHR3-212ENST00000487084 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.96■■□□□ 1.59
CDHR3-212ENST00000487084 MTCH2Q9Y6C9 303 aa24.96■■□□□ 1.59
CDHR3-212ENST00000487084 C9IYK1 514 aa24.95■■□□□ 1.58
CDHR3-212ENST00000487084 LPXNO60711 386 aa24.95■■□□□ 1.58
CDHR3-212ENST00000487084 SRGAP2CP0DJJ0 459 aa24.95■■□□□ 1.58
CDHR3-212ENST00000487084 CTNNB1P35222 781 aa24.95■■□□□ 1.58
CDHR3-212ENST00000487084 RARRES1P49788 294 aa24.95■■□□□ 1.58
CDHR3-212ENST00000487084 GATMP50440 423 aa24.95■■□□□ 1.58
CDHR3-212ENST00000487084 FXR2P51116 673 aaKnown RBP eCLIP24.95■■□□□ 1.58
CDHR3-212ENST00000487084 POTEGQ6S5H5 508 aa24.95■■□□□ 1.58
CDHR3-212ENST00000487084 TMEM192Q8IY95 271 aa24.95■■□□□ 1.58
CDHR3-212ENST00000487084 POLR3CQ9BUI4 534 aaPredicted RBP24.95■■□□□ 1.58
CDHR3-212ENST00000487084 RAB34Q9BZG1 259 aa24.95■■□□□ 1.58
CDHR3-212ENST00000487084 INO80BQ9C086 356 aaPredicted RBP24.95■■□□□ 1.58
CDHR3-212ENST00000487084 FOXD4L1Q9NU39 408 aa24.95■■□□□ 1.58
CDHR3-212ENST00000487084 RNF216Q9NWF9 866 aaPredicted RBP24.95■■□□□ 1.58
CDHR3-212ENST00000487084 LRWD1Q9UFC0 647 aa24.95■■□□□ 1.58
CDHR3-212ENST00000487084 COL4A4P53420 1690 aaPredicted RBP24.94■■□□□ 1.58
CDHR3-212ENST00000487084 COL4A6Q14031 1691 aa24.94■■□□□ 1.58
CDHR3-212ENST00000487084 VPS37CA5D8V6 355 aaPredicted RBP24.94■■□□□ 1.58
CDHR3-212ENST00000487084 K7ELQ4 463 aaPredicted RBP24.94■■□□□ 1.58
CDHR3-212ENST00000487084 LAD1O00515 517 aa24.94■■□□□ 1.58
CDHR3-212ENST00000487084 USO1O60763 962 aaKnown RBP24.94■■□□□ 1.58
CDHR3-212ENST00000487084 DGAT1O75907 488 aa24.94■■□□□ 1.58
CDHR3-212ENST00000487084 CCT6AP40227 531 aaKnown RBP24.94■■□□□ 1.58
CDHR3-212ENST00000487084 LAMTOR4Q0VGL1 99 aa24.94■■□□□ 1.58
CDHR3-212ENST00000487084 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.94■■□□□ 1.58
CDHR3-212ENST00000487084 CRIPAKQ8N1N5 446 aa24.94■■□□□ 1.58
CDHR3-212ENST00000487084 XPNPEP1Q9NQW7 623 aa24.94■■□□□ 1.58
CDHR3-212ENST00000487084 RPA1P27694 616 aa24.93■■□□□ 1.58
CDHR3-212ENST00000487084 CATSPER4Q7RTX7 472 aa24.93■■□□□ 1.58
CDHR3-212ENST00000487084 FERMT3Q86UX7 667 aa24.93■■□□□ 1.58
CDHR3-212ENST00000487084 CMTR2Q8IYT2 770 aaKnown RBP24.93■■□□□ 1.58
CDHR3-212ENST00000487084 RNF149Q8NC42 400 aa24.93■■□□□ 1.58
CDHR3-212ENST00000487084 RNF169Q8NCN4 708 aa24.93■■□□□ 1.58
CDHR3-212ENST00000487084 NACC1Q96RE7 527 aa24.93■■□□□ 1.58
CDHR3-212ENST00000487084 PIN4Q9Y237 131 aaKnown RBP24.93■■□□□ 1.58
CDHR3-212ENST00000487084 EYSQ5T1H1 3165 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms