RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 D2HGDHQ8N465 521 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 CHAC2Q8WUX2 184 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 CAAP1Q9H8G2 361 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 IPPKQ9H8X2 491 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 PCDH12Q9NPG4 1184 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 PARPBPQ9NWS1 579 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 MAPRE3Q9UPY8 281 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 NOP58Q9Y2X3 529 aaKnown RBP4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 NUB1Q9Y5A7 615 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 PCDHA9Q9Y5H5 950 aa4.99□□□□□ -1.61
SNRNP27-204ENST00000487029 TCRBV16S1A1N1A0A5B0 115 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 GSG1L2A8MUP6 293 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 B4E1Z4 1266 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 OPA1O60313 960 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 PTPN1P18031 435 aaKnown RBP4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 MC4RP32245 332 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 SOX5P35711 763 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 IGFALSP35858 605 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 FLT3P36888 993 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 STAT3P40763 770 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 MRE11P49959 708 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 IGBP1P78318 339 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 CCDC142Q17RM4 750 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 KIZQ2M2Z5 673 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 CNNM4Q6P4Q7 775 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 PPM1KQ8N3J5 372 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 NTN5Q8WTR8 489 aaPredicted RBP4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 ALG1Q9BT22 464 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 TARS2Q9BW92 718 aaKnown RBP4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 PCDHA8Q9Y5H6 950 aa4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 TNPO3Q9Y5L0 923 aaKnown RBP4.98□□□□□ -1.61
SNRNP27-204ENST00000487029 ARVCFO00192 962 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 RPS6KA4O75676 772 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 POU3F2P20265 443 aaPredicted RBP4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 FBLP22087 321 aaKnown RBP4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 CNGA1P29973 690 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 SCNN1GP51170 649 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 ANAPC15P60006 121 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 AMPD3Q01432 767 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 HHEXQ03014 270 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 ZNF460Q14592 562 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 STILQ15468 1287 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 CSRP2Q16527 193 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 ADGRE4PQ86SQ3 457 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 RNF180Q86T96 592 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 AHI1Q8N157 1196 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 THEMISQ8N1K5 641 aaPredicted RBP4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 NELFAQ9H3P2 528 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 RIC8BQ9NVN3 520 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 ARHGAP28Q9P2N2 729 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 SH3BP1Q9Y3L3 701 aa4.97□□□□□ -1.61
SNRNP27-204ENST00000487029 FAM83GA6ND36 823 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 PTGS1P23219 599 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 NEK4P51957 841 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 ATXN1P54253 815 aaKnown RBP4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 CD83Q01151 205 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 PAK1Q13153 545 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 SAFB2Q14151 953 aaKnown RBP eCLIP4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 CT47A1Q5JQC4 288 aaPredicted RBP4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 LRSAM1Q6UWE0 723 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 Q6ZRM9 215 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 UBE2R2Q712K3 238 aaPredicted RBP4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 ZC3H7AQ8IWR0 971 aaKnown RBP4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 SHCBP1Q8NEM2 672 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 WNK4Q96J92 1243 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 AMNQ9BXJ7 453 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 OR10A2Q9H208 303 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 INCENPQ9NQS7 918 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 GALNT8Q9NY28 637 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 BTBD7Q9P203 1132 aa4.96□□□□□ -1.62
SNRNP27-204ENST00000487029 SLC26A4O43511 780 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 NPTXRO95502 500 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 MPIG6BO95866 241 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 PEX11BO96011 259 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 JMJD7P0C870 316 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 KCNA6P17658 529 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 CRHR2Q13324 411 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 ACAP1Q15027 740 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 CFAP100Q494V2 611 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 CDCA2Q69YH5 1023 aaPredicted RBP4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 ZCCHC8Q6NZY4 707 aaKnown RBP4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 CXXC5Q7LFL8 322 aaKnown RBP4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 DDX53Q86TM3 631 aaKnown RBP4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 VRK3Q8IV63 474 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 PCDH19Q8TAB3 1148 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 MSL2Q9HCI7 577 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 SRPK3Q9UPE1 567 aa4.95□□□□□ -1.62
SNRNP27-204ENST00000487029 TMEM191CA6NGB0 347 aa4.94□□□□□ -1.62
SNRNP27-204ENST00000487029 FAM47E-STBD1D6RA91 191 aa4.94□□□□□ -1.62
SNRNP27-204ENST00000487029 MAN2B1O00754 1011 aa4.94□□□□□ -1.62
SNRNP27-204ENST00000487029 WNT9AO14904 365 aa4.94□□□□□ -1.62
SNRNP27-204ENST00000487029 KPNA6O60684 536 aa4.94□□□□□ -1.62
SNRNP27-204ENST00000487029 AMY2AP04746 511 aa4.94□□□□□ -1.62
SNRNP27-204ENST00000487029 AMY2BP19961 511 aa4.94□□□□□ -1.62
SNRNP27-204ENST00000487029 STAT5BP51692 787 aa4.94□□□□□ -1.62
SNRNP27-204ENST00000487029 PCBP1Q15365 356 aaKnown RBP eCLIP4.94□□□□□ -1.62
SNRNP27-204ENST00000487029 MBNL2Q5VZF2 373 aaKnown RBP4.94□□□□□ -1.62
SNRNP27-204ENST00000487029 KANK2Q63ZY3 851 aa4.94□□□□□ -1.62
SNRNP27-204ENST00000487029 ABHD17CQ6PCB6 329 aa4.94□□□□□ -1.62
SNRNP27-204ENST00000487029 ARHGAP36Q6ZRI8 547 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms