RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 CPA6Q8N4T0 437 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 ZBTB38Q8NAP3 1195 aaPredicted RBP6.15□□□□□ -1.42
SF1-217ENST00000486960 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.15□□□□□ -1.42
SF1-217ENST00000486960 PHC3Q8NDX5 983 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 UHMK1Q8TAS1 419 aaKnown RBP6.15□□□□□ -1.42
SF1-217ENST00000486960 BICD2Q8TD16 824 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 USP6NLQ92738 828 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 ARHGEF2Q92974 986 aaKnown RBP6.15□□□□□ -1.42
SF1-217ENST00000486960 USP13Q92995 863 aaPredicted RBP6.15□□□□□ -1.42
SF1-217ENST00000486960 KIFC2Q96AC6 838 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 RADILQ96JH8 1075 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 CNDP2Q96KP4 475 aaKnown RBP6.15□□□□□ -1.42
SF1-217ENST00000486960 ZNF396Q96N95 335 aaPredicted RBP6.15□□□□□ -1.42
SF1-217ENST00000486960 AIFM3Q96NN9 605 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 NEK1Q96PY6 1258 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 FERD3LQ96RJ6 166 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 TTC1Q99614 292 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 LZTS2Q9BRK4 669 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 TNKS2Q9H2K2 1166 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 FNIP2Q9P278 1114 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 ZMAT5Q9UDW3 170 aaKnown RBP6.15□□□□□ -1.42
SF1-217ENST00000486960 PCDHB3Q9Y5E6 796 aa6.15□□□□□ -1.42
SF1-217ENST00000486960 IL16Q14005 1332 aa6.15□□□□□ -1.43
SF1-217ENST00000486960 RTL1A6NKG5 1358 aa6.15□□□□□ -1.43
SF1-217ENST00000486960 AK9Q5TCS8 1911 aa6.15□□□□□ -1.43
SF1-217ENST00000486960 TECTAO75443 2155 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 DDX60Q8IY21 1712 aaKnown RBP6.14□□□□□ -1.43
SF1-217ENST00000486960 FRMPD3Q5JV73 1810 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 ZNF462Q96JM2 2506 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 POTEB3A0JP26 581 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 FSD2A1L4K1 749 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 MANSC4A6NHS7 340 aaPredicted RBP6.14□□□□□ -1.43
SF1-217ENST00000486960 ARHGAP33O14559 1287 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 P4HA2O15460 535 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 APOA4P06727 396 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 TPM3P06753 285 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 ASGR2P07307 311 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 SFTPCP11686 197 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 RHCEP18577 417 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 PTPREP23469 700 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 GRK4P32298 578 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 PBX2P40425 430 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 RECQLP46063 649 aaPredicted RBP6.14□□□□□ -1.43
SF1-217ENST00000486960 AMPHP49418 695 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 RGS3P49796 1198 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 NLRP12P59046 1061 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 RAC1P63000 192 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 ST5P78524 1137 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 RHDQ02161 417 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 TAF7Q15545 349 aaPredicted RBP6.14□□□□□ -1.43
SF1-217ENST00000486960 KIF4BQ2VIQ3 1234 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 CCDC30Q5VVM6 783 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 PDE12Q6L8Q7 609 aaKnown RBP6.14□□□□□ -1.43
SF1-217ENST00000486960 POTEBQ6S5H4 581 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 CRTC1Q6UUV9 634 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 CCDC149Q6ZUS6 474 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 NUDT18Q6ZVK8 323 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 RUFY3Q7L099 469 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 BEND5Q7L4P6 421 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 SLITRK4Q8IW52 837 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 COG1Q8WTW3 980 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 CCDC74AQ96AQ1 378 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 CLMNQ96JQ2 1002 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 UBXN10Q96LJ8 280 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 TSGA13Q96PP4 275 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 FAM193BQ96PV7 902 aaPredicted RBP6.14□□□□□ -1.43
SF1-217ENST00000486960 CHCHD6Q9BRQ6 235 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 WDR12Q9GZL7 423 aaKnown RBP6.14□□□□□ -1.43
SF1-217ENST00000486960 EHMT1Q9H9B1 1298 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 FAM86C1Q9NVL1 165 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 DUSP12Q9UNI6 340 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 MTF2Q9Y483 593 aaPredicted RBP6.14□□□□□ -1.43
SF1-217ENST00000486960 CEP83Q9Y592 693 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 FAM205AQ6ZU69 1335 aa6.14□□□□□ -1.43
SF1-217ENST00000486960 ANKRD17O75179 2603 aaKnown RBP6.13□□□□□ -1.43
SF1-217ENST00000486960 VGLL3A8MV65 326 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 ERVV-2B6SEH9 535 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 PSMD14O00487 310 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 CASQ2O14958 399 aaPredicted RBP6.13□□□□□ -1.43
SF1-217ENST00000486960 CCP110O43303 1012 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 FRS3O43559 492 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 USO1O60763 962 aaKnown RBP6.13□□□□□ -1.43
SF1-217ENST00000486960 LTFP02788 710 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 THEGLP0DJG4 465 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 MYBL2P10244 700 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 SKILP12757 684 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 EEF2P13639 858 aaKnown RBP6.13□□□□□ -1.43
SF1-217ENST00000486960 P4HA1P13674 534 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 VCAM1P19320 739 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 POLR2BP30876 1174 aaKnown RBP6.13□□□□□ -1.43
SF1-217ENST00000486960 TNNT3P45378 269 aaPredicted RBP6.13□□□□□ -1.43
SF1-217ENST00000486960 ID4P47928 161 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 NPTX2P47972 431 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 RCAN1P53805 252 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 NRLP54845 237 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 MECOMQ03112 1051 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 CCDC15Q0P6D6 951 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 PRKG1Q13976 671 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 ANKRD1Q15327 319 aa6.13□□□□□ -1.43
SF1-217ENST00000486960 CLUL1Q15846 466 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms