RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TMEM143Q96AN5 459 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 CDHR1Q96JP9 859 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 TUFT1Q9NNX1 390 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 DNAJC17Q9NVM6 304 aaKnown RBP14.32□□□□□ -0.12
HMGN1-216ENST00000486741 PLAGL2Q9UPG8 496 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 PCDHA10Q9Y5I2 948 aa14.32□□□□□ -0.12
HMGN1-216ENST00000486741 ZNF233A6NK53 670 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 GOLGA8SH3BPF8 625 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 WNT10BO00744 389 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 WDR46O15213 610 aaKnown RBP14.31□□□□□ -0.12
HMGN1-216ENST00000486741 THAP12O43422 761 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 KRT76Q01546 638 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 CDAN1Q8IWY9 1227 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 RIN2Q8WYP3 895 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-216ENST00000486741 ELMO3Q96BJ8 720 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 STIM2Q9P246 746 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 ARHGAP20Q9P2F6 1191 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 MAPK4P31152 587 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 COG2Q14746 738 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 TERF2Q15554 542 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 STXBP2Q15833 593 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 BRDTQ58F21 947 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-216ENST00000486741 RPUSD2Q8IZ73 545 aaKnown RBP14.31□□□□□ -0.12
HMGN1-216ENST00000486741 MGARPQ8TDB4 240 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 GMCL1Q96IK5 515 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 PLCD4Q9BRC7 762 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 MSTO1Q9BUK6 570 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 IDI2Q9BXS1 227 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 HSD3B7Q9H2F3 369 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 HOXC10Q9NYD6 342 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 SNX12Q9UMY4 172 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 PHRF1Q9P1Y6 1649 aaKnown RBP14.31□□□□□ -0.12
HMGN1-216ENST00000486741 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 ANKRD65E5RJM6 399 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 PLSCR1O15162 318 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 FTLP02792 175 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-216ENST00000486741 VIMP08670 466 aaKnown RBP14.31□□□□□ -0.12
HMGN1-216ENST00000486741 JAK3P52333 1124 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 SLC35G1Q2M3R5 365 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 CCDC77Q9BR77 488 aa14.31□□□□□ -0.12
HMGN1-216ENST00000486741 MKRN1Q9UHC7 482 aaKnown RBP14.31□□□□□ -0.12
HMGN1-216ENST00000486741 ANO9A1A5B4 782 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 AKAP3O75969 853 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 HERVK_113P62684 666 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 SLC18A3Q16572 532 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 ECM1Q16610 540 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 Q3C1V9 767 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 ZNF280CQ8ND82 737 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 FAM71BQ8TC56 605 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 RNF181Q9P0P0 153 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 AKT3Q9Y243 479 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 IKBKGQ9Y6K9 419 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 EVI5O60447 810 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 SEMA3FQ13275 785 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 MED15Q96RN5 788 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 PACSIN1Q9BY11 444 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 RAB17Q9H0T7 212 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 ADAM21Q9UKJ8 722 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 PNMA2Q9UL42 364 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 ZNF142P52746 1687 aaPredicted RBP14.3□□□□□ -0.12
HMGN1-216ENST00000486741 ACOT2P49753 483 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 SOX10P56693 466 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 LACTBP83111 547 aaPredicted RBP14.3□□□□□ -0.12
HMGN1-216ENST00000486741 FAM160B1Q5W0V3 765 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 MICALCLQ6ZW33 695 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 DPP9Q86TI2 863 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 SESTD1Q86VW0 696 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 DNAJC7Q99615 494 aa14.3□□□□□ -0.12
HMGN1-216ENST00000486741 MEIS2O14770 477 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 CYP26A1O43174 497 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 KIF4AO95239 1232 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 FMO5P49326 533 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 CASP5P51878 434 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 EPHB4P54760 987 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 ADCY1Q08828 1119 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 PNKPQ96T60 521 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 ACAD9Q9H845 621 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 SEL1LQ9UBV2 794 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 EPHB6O15197 1021 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 ADCY8P40145 1251 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 IRX5P78411 483 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-216ENST00000486741 EDRF1Q3B7T1 1238 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 EPC2Q52LR7 807 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 OTUD6BQ8N6M0 293 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 BCAS4Q8TDM0 211 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 PURBQ96QR8 312 aaKnown RBP14.29□□□□□ -0.12
HMGN1-216ENST00000486741 PDGFDQ9GZP0 370 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-216ENST00000486741 POLR3FQ9H1D9 316 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-216ENST00000486741 DAAM1Q9Y4D1 1078 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 MORC2Q9Y6X9 1032 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-216ENST00000486741 E7EVH7 732 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 BUB1BO60566 1050 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-216ENST00000486741 GABPAQ06546 454 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 TTC16Q8NEE8 873 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 SPATA20Q8TB22 786 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 MAK16Q9BXY0 300 aaKnown RBP14.29□□□□□ -0.12
HMGN1-216ENST00000486741 ELP3Q9H9T3 547 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 MED4Q9NPJ6 270 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 USP20Q9Y2K6 914 aa14.29□□□□□ -0.12
HMGN1-216ENST00000486741 ROBO1Q9Y6N7 1651 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms