RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 RGL1Q9NZL6 768 aa14.47□□□□□ -0.09
SSR4-211ENST00000486204 SLITRK3O94933 977 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 P4HBP07237 508 aaKnown RBP14.46□□□□□ -0.09
SSR4-211ENST00000486204 SELPP16109 830 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 TECP42680 631 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 CYP4A11Q02928 519 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 MBTPS1Q14703 1052 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 TCEAL5Q5H9L2 206 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 ZNF618Q5T7W0 954 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 TAF2Q6P1X5 1199 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 MTHFD1LQ6UB35 978 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 ANO5Q75V66 913 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 LRRC8DQ7L1W4 858 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 TRMT1LQ7Z2T5 733 aaKnown RBP14.46□□□□□ -0.09
SSR4-211ENST00000486204 RPAINQ86UA6 219 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 IGSF22Q8N9C0 903 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 TNPO1Q92973 898 aaKnown RBP14.46□□□□□ -0.09
SSR4-211ENST00000486204 POP1Q99575 1024 aaKnown RBP14.46□□□□□ -0.09
SSR4-211ENST00000486204 NIFKQ9BYG3 293 aaKnown RBP14.46□□□□□ -0.09
SSR4-211ENST00000486204 FAM86C1Q9NVL1 165 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 CLDND1Q9NY35 253 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 INSL6Q9Y581 213 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 PCDHA2Q9Y5H9 948 aa14.46□□□□□ -0.09
SSR4-211ENST00000486204 TMEM221A6NGB7 291 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 M0R296 226 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 EFCAB14O75071 495 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 CAND2O75155 1236 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 PARNO95453 639 aaKnown RBP14.45□□□□□ -0.1
SSR4-211ENST00000486204 SPATA31C1P0DKV0 1188 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 KLRC1P26715 233 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 IKBKEQ14164 716 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 CTTNQ14247 550 aaKnown RBP14.45□□□□□ -0.1
SSR4-211ENST00000486204 COL19A1Q14993 1142 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 SMAD2Q15796 467 aaKnown RBP14.45□□□□□ -0.1
SSR4-211ENST00000486204 TCTN1Q2MV58 587 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 XKR3Q5GH77 459 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 SUGP1Q8IWZ8 645 aaKnown RBP14.45□□□□□ -0.1
SSR4-211ENST00000486204 C4orf19Q8IY42 314 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 LINC01465Q8N7H1 131 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 SEPT9Q9UHD8 586 aaPredicted RBP14.45□□□□□ -0.1
SSR4-211ENST00000486204 CEP131Q9UPN4 1083 aa14.45□□□□□ -0.1
SSR4-211ENST00000486204 SMIM35A0A1B0GVV1 85 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 NBNO60934 754 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 MED24O75448 989 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 LYPLA2O95372 231 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 CXCL10P02778 98 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 ZSCAN22P10073 491 aaPredicted RBP14.44□□□□□ -0.1
SSR4-211ENST00000486204 THPOP40225 353 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 MGAT3Q09327 533 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 PTPAQ15257 358 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 SF3A1Q15459 793 aaKnown RBP14.44□□□□□ -0.1
SSR4-211ENST00000486204 TMEM266Q2M3C6 531 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 EPC2Q52LR7 807 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 FAM26DQ5JW98 314 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 PLA2G4FQ68DD2 849 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 TRIM67Q6ZTA4 783 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 DNAJB3Q8WWF6 145 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 ATOH1Q92858 354 aaPredicted RBP14.44□□□□□ -0.1
SSR4-211ENST00000486204 SH2D3AQ9BRG2 576 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 OSBPL7Q9BZF2 842 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 ZSCAN16Q9H4T2 348 aaPredicted RBP14.44□□□□□ -0.1
SSR4-211ENST00000486204 NSUN3Q9H649 340 aaKnown RBP14.44□□□□□ -0.1
SSR4-211ENST00000486204 ZSWIM4Q9H7M6 989 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 NRBP2Q9NSY0 501 aa14.44□□□□□ -0.1
SSR4-211ENST00000486204 H3BNC9 293 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 NCK2O43639 380 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 DKC1O60832 514 aaKnown RBP eCLIP14.43□□□□□ -0.1
SSR4-211ENST00000486204 F13A1P00488 732 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 CTSHP09668 335 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 PDIA4P13667 645 aaKnown RBP14.43□□□□□ -0.1
SSR4-211ENST00000486204 LTBRP36941 435 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 GPM6BQ13491 265 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 BECN1Q14457 450 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 PDIA5Q14554 519 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 MTERF2Q49AM1 385 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 ARL6IP4Q66PJ3 421 aaKnown RBP14.43□□□□□ -0.1
SSR4-211ENST00000486204 CATSPER3Q86XQ3 398 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 ZNF579Q8NAF0 562 aaKnown RBP14.43□□□□□ -0.1
SSR4-211ENST00000486204 SAMD11Q96NU1 681 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 USP28Q96RU2 1077 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 POLR3CQ9BUI4 534 aaPredicted RBP14.43□□□□□ -0.1
SSR4-211ENST00000486204 FAM49AQ9H0Q0 323 aaPredicted RBP14.43□□□□□ -0.1
SSR4-211ENST00000486204 TUFT1Q9NNX1 390 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 ZDHHC9Q9Y397 364 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 CLIC4Q9Y696 253 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 NLRC5Q86WI3 1866 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 TRIOO75962 3097 aa14.43□□□□□ -0.1
SSR4-211ENST00000486204 TTC3P53804 2025 aa14.42□□□□□ -0.1
SSR4-211ENST00000486204 IGKV6-21A0A0C4DH24 114 aa14.42□□□□□ -0.1
SSR4-211ENST00000486204 PP2D1A8MPX8 630 aa14.42□□□□□ -0.1
SSR4-211ENST00000486204 ZBTB39O15060 712 aa14.42□□□□□ -0.1
SSR4-211ENST00000486204 MBTPS2O43462 519 aa14.42□□□□□ -0.1
SSR4-211ENST00000486204 CHRNA1P02708 482 aa14.42□□□□□ -0.1
SSR4-211ENST00000486204 RPA1P27694 616 aa14.42□□□□□ -0.1
SSR4-211ENST00000486204 YWHABP31946 246 aaKnown RBP14.42□□□□□ -0.1
SSR4-211ENST00000486204 NPEPPSP55786 919 aa14.42□□□□□ -0.1
SSR4-211ENST00000486204 GRIN1Q05586 938 aa14.42□□□□□ -0.1
SSR4-211ENST00000486204 CLUL1Q15846 466 aa14.42□□□□□ -0.1
SSR4-211ENST00000486204 ECM1Q16610 540 aa14.42□□□□□ -0.1
SSR4-211ENST00000486204 DTHD1Q6ZMT9 781 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms