RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 FGD4Q96M96 766 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 KATNBL1Q9H079 304 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 ABHD16BQ9H3Z7 469 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 VCPKMTQ9H867 229 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 PIH1D3Q9NQM4 214 aaKnown RBP7.96□□□□□ -1.14
SMC4-217ENST00000485867 PPP1R9AQ9ULJ8 1098 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 TMX2Q9Y320 296 aa7.96□□□□□ -1.14
SMC4-217ENST00000485867 CACNA1GO43497 2377 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 LCHNA4D1U4 455 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 KIF28PB7ZC32 967 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 SRGAP3O43295 1099 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 NDUFB5O43674 189 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 NEFLP07196 543 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 ACTN1P12814 892 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 ITPKAP23677 461 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 ZP2Q05996 745 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 ORC1Q13415 861 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 TTC39AQ5SRH9 613 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 ARMCX2Q7L311 632 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 ZAR1Q86SH2 424 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 CERS3Q8IU89 383 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 MAGEB6Q8N7X4 407 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 DDX11Q96FC9 970 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 MEIS3Q99687 375 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 YIPF2Q9BWQ6 316 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 SEZ6LQ9BYH1 1024 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 HDAC5Q9UQL6 1122 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 LCTP09848 1927 aa7.95□□□□□ -1.14
SMC4-217ENST00000485867 TPRP12270 2363 aaKnown RBP7.95□□□□□ -1.14
SMC4-217ENST00000485867 GVINP1Q7Z2Y8 2422 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 GREB1LQ9C091 1923 aaPredicted RBP7.94□□□□□ -1.14
SMC4-217ENST00000485867 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.94□□□□□ -1.14
SMC4-217ENST00000485867 ECEL1O95672 775 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 PRNPP04156 253 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 CYP2C9P11712 490 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 PTGS1P23219 599 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 PSMC6P62333 389 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 ICA1Q05084 483 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 MTX1Q13505 466 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 FSCN1Q16658 493 aaKnown RBP7.94□□□□□ -1.14
SMC4-217ENST00000485867 HP1BP3Q5SSJ5 553 aaPredicted RBP7.94□□□□□ -1.14
SMC4-217ENST00000485867 TLK2Q86UE8 772 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 NEK9Q8TD19 979 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 TBC1D32Q96NH3 1257 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 TEX13BQ9BXU2 312 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 ALDH8A1Q9H2A2 487 aaPredicted RBP7.94□□□□□ -1.14
SMC4-217ENST00000485867 SH2D4AQ9H788 454 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 NPHS2Q9NP85 383 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 ADGRE2Q9UHX3 823 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 GNEQ9Y223 722 aaKnown RBP7.94□□□□□ -1.14
SMC4-217ENST00000485867 RIPK3Q9Y572 518 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 MICAL3Q7RTP6 2002 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 NLRC5Q86WI3 1866 aa7.94□□□□□ -1.14
SMC4-217ENST00000485867 MYH4Q9Y623 1939 aa7.93□□□□□ -1.14
SMC4-217ENST00000485867 H3BQ06 376 aaPredicted RBP7.93□□□□□ -1.14
SMC4-217ENST00000485867 CPNE3O75131 537 aaKnown RBP7.93□□□□□ -1.14
SMC4-217ENST00000485867 IDH1O75874 414 aaKnown RBP7.93□□□□□ -1.14
SMC4-217ENST00000485867 AKR1B1P15121 316 aa7.93□□□□□ -1.14
SMC4-217ENST00000485867 RFC2P35250 354 aa7.93□□□□□ -1.14
SMC4-217ENST00000485867 ERVK-21P61565 698 aa7.93□□□□□ -1.14
SMC4-217ENST00000485867 TNFAIP2Q03169 654 aa7.93□□□□□ -1.14
SMC4-217ENST00000485867 TCF15Q12870 199 aa7.93□□□□□ -1.14
SMC4-217ENST00000485867 SNRNP48Q6IEG0 339 aaKnown RBP7.93□□□□□ -1.14
SMC4-217ENST00000485867 NFXL1Q6ZNB6 911 aa7.93□□□□□ -1.14
SMC4-217ENST00000485867 RIOK1Q9BRS2 568 aaKnown RBP7.93□□□□□ -1.14
SMC4-217ENST00000485867 GSX1Q9H4S2 264 aaPredicted RBP7.93□□□□□ -1.14
SMC4-217ENST00000485867 ZFYVE1Q9HBF4 777 aa7.93□□□□□ -1.14
SMC4-217ENST00000485867 TRMT13Q9NUP7 481 aaKnown RBP7.93□□□□□ -1.14
SMC4-217ENST00000485867 PRKAG3Q9UGI9 489 aa7.93□□□□□ -1.14
SMC4-217ENST00000485867 MTUS1Q9ULD2 1270 aa7.93□□□□□ -1.14
SMC4-217ENST00000485867 TNKSO95271 1327 aa7.93□□□□□ -1.14
SMC4-217ENST00000485867 EPG5Q9HCE0 2579 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 FAM170BA6NMN3 283 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 ZEB2O60315 1214 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 BAIAP3O94812 1187 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 NFICP08651 508 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 SUPT20HL2P0C7V6 817 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 CYP2D6P10635 497 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 WDR5P61964 334 aaKnown RBP7.92□□□□□ -1.14
SMC4-217ENST00000485867 TNNI3KQ59H18 835 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 HERC4Q5GLZ8 1057 aaPredicted RBP7.92□□□□□ -1.14
SMC4-217ENST00000485867 CCDC158Q5M9N0 1113 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 FAM83BQ5T0W9 1011 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 NOL8Q76FK4 1167 aaKnown RBP7.92□□□□□ -1.14
SMC4-217ENST00000485867 BMP8AQ7Z5Y6 402 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 TMCO2Q7Z6W1 182 aaPredicted RBP7.92□□□□□ -1.14
SMC4-217ENST00000485867 ADHFE1Q8IWW8 467 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 CCDC144CPQ8IYA2 1237 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 ABI1Q8IZP0 508 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 ZNF512BQ96KM6 892 aaPredicted RBP7.92□□□□□ -1.14
SMC4-217ENST00000485867 CITED4Q96RK1 184 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 TGS1Q96RS0 853 aaKnown RBP7.92□□□□□ -1.14
SMC4-217ENST00000485867 CORO1BQ9BR76 489 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 FTOQ9C0B1 505 aaKnown RBP eCLIP7.92□□□□□ -1.14
SMC4-217ENST00000485867 AP5M1Q9H0R1 490 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 SEMA6CQ9H3T2 930 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 ACSS3Q9H6R3 686 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 ABCB6Q9NP58 842 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 FAM105AQ9NUU6 356 aa7.92□□□□□ -1.14
SMC4-217ENST00000485867 FAM86C1Q9NVL1 165 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms