RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 SCLT1Q96NL6 688 aa19.31■□□□□ 0.68
SMC4-216ENST00000485645 C11orf16Q9NQ32 467 aa19.31■□□□□ 0.68
SMC4-216ENST00000485645 TYW1Q9NV66 732 aaKnown RBP19.31■□□□□ 0.68
SMC4-216ENST00000485645 CD207Q9UJ71 328 aa19.31■□□□□ 0.68
SMC4-216ENST00000485645 FAM86C2PA6NEL3 165 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 HOXA2O43364 376 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 CDKL5O76039 1030 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 SMAD4Q13485 552 aaKnown RBP19.3■□□□□ 0.68
SMC4-216ENST00000485645 TARBP2Q15633 366 aaKnown RBP19.3■□□□□ 0.68
SMC4-216ENST00000485645 CSPP1Q1MSJ5 1256 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 XKR3Q5GH77 459 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 ERICH6BQ5W0A0 696 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 B3GNT9Q6UX72 402 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 KRT25Q7Z3Z0 450 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 RBM23Q86U06 439 aaKnown RBP19.3■□□□□ 0.68
SMC4-216ENST00000485645 THNSL1Q8IYQ7 743 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 EFHBQ8N7U6 833 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 COLGALT1Q8NBJ5 622 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 NLRP7Q8WX94 980 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 MBOAT7Q96N66 472 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 NIFKQ9BYG3 293 aaKnown RBP19.3■□□□□ 0.68
SMC4-216ENST00000485645 TMEM117Q9H0C3 514 aa19.3■□□□□ 0.68
SMC4-216ENST00000485645 SEPT9Q9UHD8 586 aaPredicted RBP19.3■□□□□ 0.68
SMC4-216ENST00000485645 DDX25Q9UHL0 483 aaKnown RBP19.3■□□□□ 0.68
SMC4-216ENST00000485645 PLXNA4Q9HCM2 1894 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 C19orf67A6NJJ6 358 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 FGF18O76093 207 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 DARSP14868 501 aaKnown RBP19.29■□□□□ 0.68
SMC4-216ENST00000485645 NRIP1P48552 1158 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 CDC42EP1Q00587 391 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 SCRN1Q12765 414 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 INF2Q27J81 1249 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 MTERF2Q49AM1 385 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 ETNPPLQ8TBG4 499 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 SLKQ9H2G2 1235 aaPredicted RBP19.29■□□□□ 0.68
SMC4-216ENST00000485645 CWH43Q9H720 699 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 TLR9Q9NR96 1032 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 HCSTQ9UBK5 93 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 KCNJ14Q9UNX9 436 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 HCN4Q9Y3Q4 1203 aa19.29■□□□□ 0.68
SMC4-216ENST00000485645 XBP1P17861 261 aa19.28■□□□□ 0.68
SMC4-216ENST00000485645 LAG3P18627 525 aa19.28■□□□□ 0.68
SMC4-216ENST00000485645 DNM2P50570 870 aa19.28■□□□□ 0.68
SMC4-216ENST00000485645 LETM2Q2VYF4 491 aa19.28■□□□□ 0.68
SMC4-216ENST00000485645 ECHDC2Q86YB7 292 aa19.28■□□□□ 0.68
SMC4-216ENST00000485645 ABI1Q8IZP0 508 aa19.28■□□□□ 0.68
SMC4-216ENST00000485645 MSLNLQ96KJ4 702 aa19.28■□□□□ 0.68
SMC4-216ENST00000485645 CASD1Q96PB1 797 aa19.28■□□□□ 0.68
SMC4-216ENST00000485645 POP1Q99575 1024 aaKnown RBP19.28■□□□□ 0.68
SMC4-216ENST00000485645 PHF20Q9BVI0 1012 aa19.28■□□□□ 0.68
SMC4-216ENST00000485645 TLE6Q9H808 572 aa19.28■□□□□ 0.68
SMC4-216ENST00000485645 PCDHGC5Q9Y5F6 944 aa19.28■□□□□ 0.68
SMC4-216ENST00000485645 CCDC194A0A1B0GVG4 234 aa19.27■□□□□ 0.68
SMC4-216ENST00000485645 DCXO43602 365 aa19.27■□□□□ 0.68
SMC4-216ENST00000485645 STBD1O95210 358 aa19.27■□□□□ 0.68
SMC4-216ENST00000485645 DRP2Q13474 957 aa19.27■□□□□ 0.68
SMC4-216ENST00000485645 PDE12Q6L8Q7 609 aaKnown RBP19.27■□□□□ 0.68
SMC4-216ENST00000485645 GCOM2Q9BZD3 368 aaPredicted RBP19.27■□□□□ 0.68
SMC4-216ENST00000485645 RNF19AQ9NV58 838 aa19.27■□□□□ 0.68
SMC4-216ENST00000485645 DACT1Q9NYF0 836 aa19.27■□□□□ 0.68
SMC4-216ENST00000485645 CLEC1BQ9P126 229 aa19.27■□□□□ 0.68
SMC4-216ENST00000485645 STK36Q9NRP7 1315 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 IGKV6-21A0A0C4DH24 114 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 A0A0U1RQF3 1178 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 TMEM150BA6NC51 233 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 DDX11L8A8MPP1 907 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 SLC37A4O43826 429 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 EYA4O95677 639 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 FGFR4P22455 802 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 ERVFC1P60507 584 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 PSMC5P62195 406 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 LRRC55Q6ZSA7 311 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 NEK8Q86SG6 692 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 LRRC43Q8N309 656 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 RNF169Q8NCN4 708 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 FAM122AQ96E09 287 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 CEP89Q96ST8 783 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 SH2D3AQ9BRG2 576 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 PPP4R2Q9NY27 417 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 PUF60Q9UHX1 559 aaKnown RBP19.26■□□□□ 0.67
SMC4-216ENST00000485645 LZTS1Q9Y250 596 aa19.26■□□□□ 0.67
SMC4-216ENST00000485645 FSD2A1L4K1 749 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 PRR33A8MZF0 331 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 PER2O15055 1255 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 PFKFB2O60825 505 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 CSDE1O75534 798 aaKnown RBP19.25■□□□□ 0.67
SMC4-216ENST00000485645 GLP2RO95838 553 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 EOMESO95936 686 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 PLA2G5P39877 138 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 PLCB3Q01970 1234 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 COASYQ13057 564 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 PPP4R3AQ6IN85 833 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 KCNT2Q6UVM3 1135 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 SMRP1Q8NCR6 262 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 MRPS27Q92552 414 aaKnown RBP19.25■□□□□ 0.67
SMC4-216ENST00000485645 FAM20AQ96MK3 541 aa19.25■□□□□ 0.67
SMC4-216ENST00000485645 CDCA3Q99618 268 aaPredicted RBP19.25■□□□□ 0.67
SMC4-216ENST00000485645 JPH2Q9BR39 696 aaPredicted RBP19.25■□□□□ 0.67
SMC4-216ENST00000485645 INO80BQ9C086 356 aaPredicted RBP19.25■□□□□ 0.67
SMC4-216ENST00000485645 CHST12Q9NRB3 414 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms