RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 GGPS1O95749 300 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 CHRNA1P02708 482 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 CNR2P34972 360 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 SOX11P35716 441 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 SARSP49591 514 aaKnown RBP7.31□□□□□ -1.24
CAPN13-206ENST00000485248 USP46P62068 366 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 MLF2Q15773 248 aaPredicted RBP7.31□□□□□ -1.24
CAPN13-206ENST00000485248 CTR9Q6PD62 1173 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 RSPO2Q6UXX9 243 aaPredicted RBP7.31□□□□□ -1.24
CAPN13-206ENST00000485248 C15orf39Q6ZRI6 1047 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 LRRC43Q8N309 656 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 PHKBQ93100 1093 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 SNX21Q969T3 373 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 TMEM169Q96HH4 297 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 RMDN3Q96TC7 470 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 EMILIN2Q9BXX0 1053 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 OSBPL7Q9BZF2 842 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 API5Q9BZZ5 524 aaKnown RBP7.31□□□□□ -1.24
CAPN13-206ENST00000485248 EHMT1Q9H9B1 1298 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 PIDD1Q9HB75 910 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 ATP6V0A4Q9HBG4 840 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 SLC2A4RGQ9NR83 387 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 C1orf112Q9NSG2 853 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 SPG21Q9NZD8 308 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 DBNLQ9UJU6 430 aaKnown RBP7.31□□□□□ -1.24
CAPN13-206ENST00000485248 PCDHGC3Q9UN70 934 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 CDY2AQ9Y6F7 541 aa7.31□□□□□ -1.24
CAPN13-206ENST00000485248 CLUHO75153 1309 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 GOLIM4O00461 696 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 ARHGAP6O43182 974 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 SURF6O75683 361 aaKnown RBP7.3□□□□□ -1.24
CAPN13-206ENST00000485248 EIF3JO75822 258 aaKnown RBP7.3□□□□□ -1.24
CAPN13-206ENST00000485248 GNAI2P04899 355 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 LGALS2P05162 132 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 EPCAMP16422 314 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 TDO2P48775 406 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 CCR3P51677 355 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 MRPS6P82932 125 aaKnown RBP7.3□□□□□ -1.24
CAPN13-206ENST00000485248 GUCA2AQ02747 115 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 NFX1Q12986 1120 aaKnown RBP7.3□□□□□ -1.24
CAPN13-206ENST00000485248 HSDL1Q3SXM5 330 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 SYDE2Q5VT97 1194 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 KANK3Q6NY19 840 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 KCNT2Q6UVM3 1135 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 CLEC17AQ6ZS10 378 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 MCF2L2Q86YR7 1114 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 EPS8L1Q8TE68 723 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 TSC1Q92574 1164 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 C16orf70Q9BSU1 422 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 IER2Q9BTL4 223 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 RWDD1Q9H446 243 aaPredicted RBP7.3□□□□□ -1.24
CAPN13-206ENST00000485248 LTB4R2Q9NPC1 389 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 PRMT8Q9NR22 394 aaPredicted RBP7.3□□□□□ -1.24
CAPN13-206ENST00000485248 EPS15L1Q9UBC2 864 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 GPSM3Q9Y4H4 160 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 NEUROG3Q9Y4Z2 214 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 SQORQ9Y6N5 450 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 SPEGQ15772 3267 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 LOXHD1Q8IVV2 1947 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 KAT6AQ92794 2004 aa7.3□□□□□ -1.24
CAPN13-206ENST00000485248 FNDC1Q4ZHG4 1894 aaPredicted RBP7.3□□□□□ -1.24
CAPN13-206ENST00000485248 CACNA1IQ9P0X4 2223 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 MYH7P12883 1935 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 PRDM1O75626 825 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 BCAR3O75815 825 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 MYCLP12524 364 aaPredicted RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 HOXD8P13378 290 aaPredicted RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 EIF2AK2P19525 551 aaKnown RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 KLRC2P26717 231 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 RPS9P46781 194 aaKnown RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 ALDH7A1P49419 539 aaKnown RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 SEMA3FQ13275 785 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 HDAC1Q13547 482 aaPredicted RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 SF3A2Q15428 464 aaKnown RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 SKOR2Q2VWA4 1001 aaPredicted RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 USH1GQ495M9 461 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 CELF3Q5SZQ8 465 aaKnown RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 LARP1BQ659C4 914 aaKnown RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 ZSCAN25Q6NSZ9 544 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 KIAA1211LQ6NV74 962 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 FAM43BQ6ZT52 329 aaPredicted RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 GET4Q7L5D6 327 aaPredicted RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 PROSER1Q86XN7 944 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 TMEFF1Q8IYR6 380 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 DCAF4Q8WV16 495 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 LMBR1Q8WVP7 490 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 DNAJB3Q8WWF6 145 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 NELL1Q92832 810 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 MAP4K1Q92918 833 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 LRIG1Q96JA1 1093 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 MYADMQ96S97 322 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 TLR7Q9NYK1 1049 aaKnown RBP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.29□□□□□ -1.24
CAPN13-206ENST00000485248 TUBE1Q9UJT0 475 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 PADI3Q9ULW8 664 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 TRPV2Q9Y5S1 764 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 NUMBLQ9Y6R0 609 aa7.29□□□□□ -1.24
CAPN13-206ENST00000485248 IGKV6D-41A0A0C4DH26 115 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 CYSRT1A8MQ03 144 aa7.28□□□□□ -1.24
CAPN13-206ENST00000485248 J3QKU1 62 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms