RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ADGRD2Q7Z7M1 963 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 CEP89Q96ST8 783 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 POP1Q99575 1024 aaKnown RBP12.92□□□□□ -0.34
SCFD1-206ENST00000484733 CDCA3Q99618 268 aaPredicted RBP12.92□□□□□ -0.34
SCFD1-206ENST00000484733 RNF19AQ9NV58 838 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 HCN4Q9Y3Q4 1203 aa12.92□□□□□ -0.34
SCFD1-206ENST00000484733 IGKV6-21A0A0C4DH24 114 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 DARSP14868 501 aaKnown RBP12.91□□□□□ -0.34
SCFD1-206ENST00000484733 PLCB3Q01970 1234 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 MIER3Q7Z3K6 550 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 ETNPPLQ8TBG4 499 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 FAM122AQ96E09 287 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 CASD1Q96PB1 797 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 PPP1R16BQ96T49 567 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 TYW1Q9NV66 732 aaKnown RBP12.91□□□□□ -0.34
SCFD1-206ENST00000484733 DCXO43602 365 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 FGF18O76093 207 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 ZSCAN20P17040 1043 aaPredicted RBP12.91□□□□□ -0.34
SCFD1-206ENST00000484733 NONOQ15233 471 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCFD1-206ENST00000484733 SPOUT1Q5T280 376 aaKnown RBP12.91□□□□□ -0.34
SCFD1-206ENST00000484733 KRT25Q7Z3Z0 450 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 ECHDC2Q86YB7 292 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 LRRC71Q8N4P6 559 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 TLR9Q9NR96 1032 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 PDRG1Q9NUG6 133 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 CLEC1BQ9P126 229 aa12.91□□□□□ -0.34
SCFD1-206ENST00000484733 TDP2O95551 362 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 EOMESO95936 686 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 NDUFV1P49821 464 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 TBC1D8BQ0IIM8 1120 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 RSPH1Q8WYR4 309 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 STK36Q9NRP7 1315 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 FAM86C2PA6NEL3 165 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 CHMP2AO43633 222 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 FGFR1P11362 822 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 NRIP1P48552 1158 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 TRMT1LQ7Z2T5 733 aaKnown RBP12.9□□□□□ -0.34
SCFD1-206ENST00000484733 ZNF598Q86UK7 904 aaKnown RBP12.9□□□□□ -0.34
SCFD1-206ENST00000484733 PHF20Q9BVI0 1012 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 TRAIPQ9BWF2 469 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 CHST12Q9NRB3 414 aa12.9□□□□□ -0.34
SCFD1-206ENST00000484733 A0A0U1RQF3 1178 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 CDKL5O76039 1030 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 GLP2RO95838 553 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 DUSP6Q16828 381 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 TMEM184AQ6ZMB5 413 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 LRRC55Q6ZSA7 311 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 THNSL1Q8IYQ7 743 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 SMRP1Q8NCR6 262 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 MRPS27Q92552 414 aaKnown RBP12.89□□□□□ -0.35
SCFD1-206ENST00000484733 GCOM2Q9BZD3 368 aaPredicted RBP12.89□□□□□ -0.35
SCFD1-206ENST00000484733 TLE6Q9H808 572 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 MYO7AQ13402 2215 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 DNM2P50570 870 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 CLUL1Q15846 466 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 PPP4R3AQ6IN85 833 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 ZNF410Q86VK4 478 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 LRRC43Q8N309 656 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 GJA10Q969M2 543 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 FAM20AQ96MK3 541 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 NAP1L4Q99733 375 aaKnown RBP12.89□□□□□ -0.35
SCFD1-206ENST00000484733 DACT1Q9NYF0 836 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 DDX25Q9UHL0 483 aaKnown RBP12.89□□□□□ -0.35
SCFD1-206ENST00000484733 PUF60Q9UHX1 559 aaKnown RBP12.89□□□□□ -0.35
SCFD1-206ENST00000484733 PPME1Q9Y570 386 aa12.89□□□□□ -0.35
SCFD1-206ENST00000484733 DKC1O60832 514 aaKnown RBP eCLIP12.88□□□□□ -0.35
SCFD1-206ENST00000484733 MAFO75444 373 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-206ENST00000484733 GCFC2P16383 781 aaKnown RBP12.88□□□□□ -0.35
SCFD1-206ENST00000484733 IBSPP21815 317 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-206ENST00000484733 PPM1AP35813 382 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 ERVFC1P60507 584 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 PSMC5P62195 406 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 PPP2R5CQ13362 524 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 HERC4Q5GLZ8 1057 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-206ENST00000484733 ZNF558Q96NG5 402 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 AIFM3Q96NN9 605 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 JPH2Q9BR39 696 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-206ENST00000484733 INO80BQ9C086 356 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-206ENST00000484733 KCNMB3Q9NPA1 279 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 HCSTQ9UBK5 93 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 SEPT9Q9UHD8 586 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-206ENST00000484733 TBX3O15119 743 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 PFKFB2O60825 505 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 SCRN1Q12765 414 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 STK3Q13188 491 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 KCNC3Q14003 757 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 MTERF2Q49AM1 385 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 CLLU1OSQ5K130 101 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 KCNT2Q6UVM3 1135 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 MICAL1Q8TDZ2 1067 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 NLRP7Q8WX94 980 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
SCFD1-206ENST00000484733 PCDHGC5Q9Y5F6 944 aa12.88□□□□□ -0.35
SCFD1-206ENST00000484733 CARNS1A5YM72 827 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 DDX11L8A8MPP1 907 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 LOC730098B7Z3J9 87 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 CSPG5O95196 566 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 ATF7P17544 494 aaPredicted RBP12.87□□□□□ -0.35
SCFD1-206ENST00000484733 XBP1P17861 261 aa12.87□□□□□ -0.35
SCFD1-206ENST00000484733 ANAPC15P60006 121 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms