RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 HNRNPCL4P0DMR1 293 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 PCP11498 1178 aaKnown RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 ATP1A3P13637 1013 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 GAP43P17677 238 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 PAMP19021 973 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 TFEBP19484 476 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 TECP42680 631 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 BAG6P46379 1132 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 ETV1P50549 477 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 SIK1P57059 783 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 NLRP5P59047 1200 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 RNASE9P60153 205 aaKnown RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 RBM6P78332 1123 aaKnown RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 NUCB2P80303 420 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 MAP3K10Q02779 954 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 CYP4A11Q02928 519 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 MLLT1Q03111 559 aaPredicted RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 RELQ04864 619 aaPredicted RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 DEUP1Q05D60 604 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 ZNF252P-AS1Q0IIN9 211 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 KIF5AQ12840 1032 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 GRSF1Q12849 480 aaKnown RBP eCLIP3.84□□□□□ -1.79
FXN-204ENST00000484259 KLF1Q13351 362 aaPredicted RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 SNAPC2Q13487 334 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 LAPTM5Q13571 262 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 NCAPHQ15003 741 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 SART3Q15020 963 aaKnown RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 STK11Q15831 433 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 KIAA0753Q2KHM9 967 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 SUPT20HL1Q3ZLR7 823 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 BOLA3Q53S33 107 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 RNFT1Q5M7Z0 435 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 ZMYM1Q5SVZ6 1142 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 IZUMO3Q5VZ72 239 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 MRM1Q6IN84 353 aaKnown RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 DARS2Q6PI48 645 aaKnown RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 KCNV1Q6PIU1 500 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 POMZP3Q6PJE2 187 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 ELMSAN1Q6PJG2 1045 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 UBE2R2Q712K3 238 aaPredicted RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 B4GALNT4Q76KP1 1039 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 SV2BQ7L1I2 683 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 DNAJB7Q7Z6W7 309 aaPredicted RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 ZBTB33Q86T24 672 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 PPFIBP1Q86W92 1011 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 SPATA2LQ8IUW3 424 aaPredicted RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 GALNT12Q8IXK2 581 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 CCDC33Q8N5R6 958 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 TSPYL6Q8N831 410 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 ANKRD53Q8N9V6 530 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 ANKRD52Q8NB46 1076 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 FAM156AQ8NDB6 213 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 GDAP1Q8TB36 358 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 ACMSDQ8TDX5 336 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 NOC3LQ8WTT2 800 aaKnown RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 FATE1Q969F0 183 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 HPS3Q969F9 1004 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 L3MBTL2Q969R5 705 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 LRRC45Q96CN5 670 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 GIMAP5Q96F15 307 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 ZDHHC15Q96MV8 337 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 PPP1R9BQ96SB3 815 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 YME1L1Q96TA2 773 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 NAP1L3Q99457 506 aaPredicted RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 TRIM56Q9BRZ2 755 aaKnown RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 TMEM120AQ9BXJ8 343 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 LRRC3Q9BY71 257 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 ARHGAP39Q9C0H5 1083 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 NUP62CLQ9H1M0 184 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 OR10A4Q9H209 315 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 VCPKMTQ9H867 229 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 ADPRHL2Q9NX46 363 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 GGA3Q9NZ52 723 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 RTEL1Q9NZ71 1219 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 GPRC5BQ9NZH0 403 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 SUCLA2Q9P2R7 463 aaPredicted RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 ZC3H7BQ9UGR2 993 aaKnown RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 EIF2B4Q9UI10 523 aaKnown RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 TEKT2Q9UIF3 430 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 HOOK1Q9UJC3 728 aaKnown RBP3.84□□□□□ -1.79
FXN-204ENST00000484259 VPS28Q9UK41 221 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 PCDHB12Q9Y5F1 795 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.84□□□□□ -1.79
FXN-204ENST00000484259 AP1M2Q9Y6Q5 423 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 USP19O94966 1318 aa3.84□□□□□ -1.79
FXN-204ENST00000484259 KIF21AQ7Z4S6 1674 aa3.84□□□□□ -1.8
FXN-204ENST00000484259 PRDM2Q13029 1718 aa3.84□□□□□ -1.8
FXN-204ENST00000484259 CYP2D7A0A087X1C5 515 aa3.83□□□□□ -1.8
FXN-204ENST00000484259 CLRN2A0PK11 232 aa3.83□□□□□ -1.8
FXN-204ENST00000484259 CTAGE9A4FU28 777 aa3.83□□□□□ -1.8
FXN-204ENST00000484259 A6NNZ2 444 aa3.83□□□□□ -1.8
FXN-204ENST00000484259 DDX39AO00148 427 aaKnown RBP3.83□□□□□ -1.8
FXN-204ENST00000484259 AGRPO00253 132 aa3.83□□□□□ -1.8
FXN-204ENST00000484259 TRAF5O00463 557 aa3.83□□□□□ -1.8
FXN-204ENST00000484259 PSMA7O14818 248 aa3.83□□□□□ -1.8
FXN-204ENST00000484259 ADAMTS3O15072 1205 aa3.83□□□□□ -1.8
FXN-204ENST00000484259 RIPK2O43353 540 aa3.83□□□□□ -1.8
FXN-204ENST00000484259 OPA1O60313 960 aa3.83□□□□□ -1.8
FXN-204ENST00000484259 DOK2O60496 412 aa3.83□□□□□ -1.8
FXN-204ENST00000484259 AOC2O75106 756 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms