RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RABGGTBP53611 331 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 ACTR2P61160 394 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 DSG2Q14126 1118 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 NEDD9Q14511 834 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 IQCB1Q15051 598 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 DPCR1Q3MIW9 517 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 LRIT3Q3SXY7 679 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 CT47A1Q5JQC4 288 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-216ENST00000484087 ZNF618Q5T7W0 954 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 RRAGBQ5VZM2 374 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 KCNV1Q6PIU1 500 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 TRAF7Q6Q0C0 670 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 SARM1Q6SZW1 724 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 SPRED2Q7Z698 418 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 ZSCAN30Q86W11 494 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 CCDC60Q8IWA6 550 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-216ENST00000484087 PLPP6Q8IY26 295 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 TMEM199Q8N511 208 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 AOPEPQ8N6M6 819 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 MLKLQ8NB16 471 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 PTCD2Q8WV60 388 aaKnown RBP7.73□□□□□ -1.17
BRCA1-216ENST00000484087 LMBR1Q8WVP7 490 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 CCDC47Q96A33 483 aaKnown RBP7.73□□□□□ -1.17
BRCA1-216ENST00000484087 LENG9Q96B70 501 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 CUEDC2Q9H467 287 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 MAGEF1Q9HAY2 307 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 JPH1Q9HDC5 661 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-216ENST00000484087 IL23AQ9NPF7 189 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 RMND1Q9NWS8 449 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 SLC9A2Q9UBY0 812 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 PCDHA5Q9Y5H7 936 aa7.73□□□□□ -1.17
BRCA1-216ENST00000484087 A0A1W2PPC1 479 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 C17orf102A2RUQ5 167 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 TMEM150BA6NC51 233 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 MEIS1O00470 390 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 DHX15O43143 795 aaKnown RBP7.72□□□□□ -1.17
BRCA1-216ENST00000484087 SLC37A4O43826 429 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 KPNA6O60684 536 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 NBNO60934 754 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 PPFIA4O75335 1185 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 ARHGEF15O94989 841 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 FOSP01100 380 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-216ENST00000484087 MYL1P05976 194 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 IQCF3P0C7M6 154 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 CKBP12277 381 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 TMEM62Q0P6H9 643 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 PPIGQ13427 754 aaKnown RBP eCLIP7.72□□□□□ -1.17
BRCA1-216ENST00000484087 CALCRLQ16602 461 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 TRIM71Q2Q1W2 868 aaKnown RBP7.72□□□□□ -1.17
BRCA1-216ENST00000484087 NT5DC1Q5TFE4 455 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 DMRTA1Q5VZB9 504 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 PPP4R3AQ6IN85 833 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 XRRA1Q6P2D8 792 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 USP49Q70CQ1 688 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 LRRC8DQ7L1W4 858 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 DEFB123Q8N688 67 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 C4orf32Q8N8J7 132 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 GLG1Q92896 1179 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 ATP6V0A1Q93050 837 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 CALML4Q96GE6 196 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 PAGE5Q96GU1 130 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 GSDMAQ96QA5 445 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 PPP1R16BQ96T49 567 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 SENP7Q9BQF6 1050 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 SH2D3AQ9BRG2 576 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 ZNF577Q9BSK1 485 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 KATNAL1Q9BW62 490 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 CCSER1Q9C0I3 900 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 TTYH1Q9H313 450 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-216ENST00000484087 EHMT1Q9H9B1 1298 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 ARID2Q68CP9 1835 aa7.72□□□□□ -1.17
BRCA1-216ENST00000484087 IPO5O00410 1097 aaKnown RBP7.71□□□□□ -1.18
BRCA1-216ENST00000484087 MSH4O15457 936 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 THPOP40225 353 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 AFMP43652 599 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 USP11P51784 963 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 ZNF75DP51815 510 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 DEFB103AP81534 67 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 AMPD3Q01432 767 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 MYL5Q02045 173 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 DHX8Q14562 1220 aaKnown RBP7.71□□□□□ -1.18
BRCA1-216ENST00000484087 UGCGQ16739 394 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 ISM2Q6H9L7 571 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 CABP7Q86V35 215 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 SESTD1Q86VW0 696 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 DHX40Q8IX18 779 aaKnown RBP7.71□□□□□ -1.18
BRCA1-216ENST00000484087 SEPT1Q8WYJ6 367 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 CDK5RAP3Q96JB5 506 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 PBX4Q9BYU1 374 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 GTPBP4Q9BZE4 634 aaKnown RBP7.71□□□□□ -1.18
BRCA1-216ENST00000484087 FAM49AQ9H0Q0 323 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-216ENST00000484087 TMEM60Q9H2L4 133 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 DISC1Q9NRI5 854 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 MAN1B1Q9UKM7 699 aa7.71□□□□□ -1.18
BRCA1-216ENST00000484087 YBX2Q9Y2T7 364 aaKnown RBP7.71□□□□□ -1.18
BRCA1-216ENST00000484087 EMSYQ7Z589 1322 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 BACH1O14867 736 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 CBFA2T2O43439 604 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 FGBP02675 491 aa7.7□□□□□ -1.18
BRCA1-216ENST00000484087 CYP3A4P08684 503 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms