RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 USTQ9Y2C2 406 aa9.83□□□□□ -0.84
RTFDC1-208ENST00000484084 IRAK3Q9Y616 596 aa9.83□□□□□ -0.84
RTFDC1-208ENST00000484084 KMT2BQ9UMN6 2715 aaPredicted RBP9.83□□□□□ -0.84
RTFDC1-208ENST00000484084 CNTNAP5Q8WYK1 1306 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 A0A0U1RQF3 1178 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 MEIS3P2A8K0S8 358 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 DDX39AO00148 427 aaKnown RBP9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 ZNF862O60290 1169 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 EOMESO95936 686 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 SRGAP2BP0DMP2 458 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 CLCN3P51790 818 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 BCAR1P56945 870 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 SMC1AQ14683 1233 aaKnown RBP9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 TPRNQ4KMQ1 711 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 RARS2Q5T160 578 aaKnown RBP9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 NIPA1Q7RTP0 329 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 HEATR3Q7Z4Q2 680 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 TNPO1Q92973 898 aaKnown RBP9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 RMDN1Q96DB5 314 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 CEP89Q96ST8 783 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 ANO3Q9BYT9 981 aa9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 FAM217BQ9NTX9 383 aaPredicted RBP9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 RBM8AQ9Y5S9 174 aaKnown RBP9.82□□□□□ -0.84
RTFDC1-208ENST00000484084 COL4A3Q01955 1670 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 KRBA1A5PL33 1030 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 NARSO43776 548 aaKnown RBP9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 LILRB3O75022 631 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 CSDE1O75534 798 aaKnown RBP9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 STBD1O95210 358 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 CXCL14O95715 111 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 FGFR4P22455 802 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 EIF4BP23588 611 aaKnown RBP9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 PPM1AP35813 382 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 MTHFRP42898 656 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 GNAQP50148 359 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 NLRP11P59045 1033 aaKnown RBP9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 KRT17Q04695 432 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 DRP2Q13474 957 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 AAMPQ13685 434 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 ANGPT1Q15389 498 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 MCTP2Q6DN12 878 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 CES5AQ6NT32 575 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 PDXDC2PQ6P474 469 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 SGMS1Q86VZ5 419 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 EXOC6Q8TAG9 804 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 HELQQ8TDG4 1101 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 BBXQ8WY36 941 aaPredicted RBP9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 LENG9Q96B70 501 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 ZNF668Q96K58 619 aaPredicted RBP9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 LRRC2Q9BYS8 371 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 LSG1Q9H089 658 aaKnown RBP9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 KCNK12Q9HB15 430 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 BRPF3Q9ULD4 1205 aa9.81□□□□□ -0.84
RTFDC1-208ENST00000484084 IPO5O00410 1097 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 BACH1O14867 736 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 PAPLNO95428 1278 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 EFEMP2O95967 443 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 CYP3A4P08684 503 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 CTSAP10619 480 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 DARSP14868 501 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 METAP2P50579 478 aaKnown RBP eCLIP9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 GPC3P51654 580 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 AFF1P51825 1210 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 NECTIN1Q15223 517 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 PTPN14Q15678 1187 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 UGCGQ16739 394 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 ATAT1Q5SQI0 421 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 EFCAB12Q6NXP0 572 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 TMC5Q6UXY8 1006 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 GPR149Q86SP6 731 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 DDX53Q86TM3 631 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 VPS52Q8N1B4 723 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 LRRC71Q8N4P6 559 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 METTL13Q8N6R0 699 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 TDRD5Q8NAT2 981 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 DTWD2Q8NBA8 298 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 FLCNQ8NFG4 579 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 IGSF21Q96ID5 467 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 TMEM87BQ96K49 555 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 TRAIPQ9BWF2 469 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 NRDE2Q9H7Z3 1164 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 CYP26B1Q9NR63 512 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 RNF216Q9NWF9 866 aaPredicted RBP9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 DLGAP2Q9P1A6 1054 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 DNAJB4Q9UDY4 337 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 DUSP12Q9UNI6 340 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 FANCMQ8IYD8 2048 aa9.8□□□□□ -0.84
RTFDC1-208ENST00000484084 MYH9P35579 1960 aaKnown RBP9.79□□□□□ -0.84
RTFDC1-208ENST00000484084 SMCO2A6NFE2 343 aa9.79□□□□□ -0.84
RTFDC1-208ENST00000484084 SLC27A2O14975 620 aa9.79□□□□□ -0.84
RTFDC1-208ENST00000484084 HOXA2O43364 376 aa9.79□□□□□ -0.84
RTFDC1-208ENST00000484084 FOSP01100 380 aaPredicted RBP9.79□□□□□ -0.84
RTFDC1-208ENST00000484084 GALTP07902 379 aa9.79□□□□□ -0.84
RTFDC1-208ENST00000484084 CALM1P0DP23 149 aa9.79□□□□□ -0.84
RTFDC1-208ENST00000484084 CALM2P0DP24 149 aa9.79□□□□□ -0.84
RTFDC1-208ENST00000484084 CALM3P0DP25 149 aa9.79□□□□□ -0.84
RTFDC1-208ENST00000484084 MCM5P33992 734 aa9.79□□□□□ -0.84
RTFDC1-208ENST00000484084 CLCN4P51793 760 aa9.79□□□□□ -0.84
RTFDC1-208ENST00000484084 TDGQ13569 410 aa9.79□□□□□ -0.84
RTFDC1-208ENST00000484084 TARBP2Q15633 366 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms