RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 EPB41L2O43491 1005 aaKnown RBP20.31■□□□□ 0.84
ATG4B-221ENST00000483778 SLC37A4O43826 429 aa20.31■□□□□ 0.84
ATG4B-221ENST00000483778 EIF4BP23588 611 aaKnown RBP20.31■□□□□ 0.84
ATG4B-221ENST00000483778 SCRN1Q12765 414 aa20.31■□□□□ 0.84
ATG4B-221ENST00000483778 SMAD2Q15796 467 aaKnown RBP20.31■□□□□ 0.84
ATG4B-221ENST00000483778 MIER3Q7Z3K6 550 aa20.31■□□□□ 0.84
ATG4B-221ENST00000483778 DAGLBQ8NCG7 672 aa20.31■□□□□ 0.84
ATG4B-221ENST00000483778 FGF18O76093 207 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 DARSP14868 501 aaKnown RBP20.3■□□□□ 0.84
ATG4B-221ENST00000483778 SFNP31947 248 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 PBX3P40426 434 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 JAK3P52333 1124 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 MTERF2Q49AM1 385 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 ODR4Q5SWX8 454 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 ECHDC2Q86YB7 292 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 ADHFE1Q8IWW8 467 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 EFHBQ8N7U6 833 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 VN1R2Q8NFZ6 395 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 OXER1Q8TDS5 423 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 MAP7D2Q96T17 732 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 NIFKQ9BYG3 293 aaKnown RBP20.3■□□□□ 0.84
ATG4B-221ENST00000483778 ELAC1Q9H777 363 aaKnown RBP20.3■□□□□ 0.84
ATG4B-221ENST00000483778 CD207Q9UJ71 328 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 TPCN1Q9ULQ1 816 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 PCDHB12Q9Y5F1 795 aa20.3■□□□□ 0.84
ATG4B-221ENST00000483778 DDX11L8A8MPP1 907 aa20.29■□□□□ 0.84
ATG4B-221ENST00000483778 CTDNEP1O95476 244 aa20.29■□□□□ 0.84
ATG4B-221ENST00000483778 TMOD1P28289 359 aa20.29■□□□□ 0.84
ATG4B-221ENST00000483778 TBC1D8BQ0IIM8 1120 aa20.29■□□□□ 0.84
ATG4B-221ENST00000483778 EARS2Q5JPH6 523 aaKnown RBP20.29■□□□□ 0.84
ATG4B-221ENST00000483778 CLLU1OSQ5K130 101 aa20.29■□□□□ 0.84
ATG4B-221ENST00000483778 ZNF579Q8NAF0 562 aaKnown RBP20.29■□□□□ 0.84
ATG4B-221ENST00000483778 PHF20Q9BVI0 1012 aa20.29■□□□□ 0.84
ATG4B-221ENST00000483778 SEPT9Q9UHD8 586 aaPredicted RBP20.29■□□□□ 0.84
ATG4B-221ENST00000483778 BARX2Q9UMQ3 279 aaPredicted RBP20.29■□□□□ 0.84
ATG4B-221ENST00000483778 IGKV6-21A0A0C4DH24 114 aa20.28■□□□□ 0.84
ATG4B-221ENST00000483778 ATF7P17544 494 aaPredicted RBP20.28■□□□□ 0.84
ATG4B-221ENST00000483778 NDUFV1P49821 464 aa20.28■□□□□ 0.84
ATG4B-221ENST00000483778 NONOQ15233 471 aaKnown RBP eCLIP20.28■□□□□ 0.842e-6■■■□□ 14.8
ATG4B-221ENST00000483778 ANO5Q75V66 913 aa20.28■□□□□ 0.84
ATG4B-221ENST00000483778 KSR1Q8IVT5 923 aa20.28■□□□□ 0.84
ATG4B-221ENST00000483778 RNF169Q8NCN4 708 aa20.28■□□□□ 0.84
ATG4B-221ENST00000483778 MICAL1Q8TDZ2 1067 aa20.28■□□□□ 0.84
ATG4B-221ENST00000483778 TLE6Q9H808 572 aa20.28■□□□□ 0.84
ATG4B-221ENST00000483778 WRAP73Q9P2S5 460 aaPredicted RBP20.28■□□□□ 0.84
ATG4B-221ENST00000483778 PRKAG3Q9UGI9 489 aa20.28■□□□□ 0.84
ATG4B-221ENST00000483778 DDX25Q9UHL0 483 aaKnown RBP20.28■□□□□ 0.84
ATG4B-221ENST00000483778 FAM205CA6NFA0 338 aa20.27■□□□□ 0.84
ATG4B-221ENST00000483778 EYA4O95677 639 aa20.27■□□□□ 0.84
ATG4B-221ENST00000483778 SMAD4Q13485 552 aaKnown RBP20.27■□□□□ 0.84
ATG4B-221ENST00000483778 LETM2Q2VYF4 491 aa20.27■□□□□ 0.84
ATG4B-221ENST00000483778 XKR3Q5GH77 459 aa20.27■□□□□ 0.84
ATG4B-221ENST00000483778 PLA2G4FQ68DD2 849 aa20.27■□□□□ 0.84
ATG4B-221ENST00000483778 ZNF598Q86UK7 904 aaKnown RBP20.27■□□□□ 0.84
ATG4B-221ENST00000483778 THNSL1Q8IYQ7 743 aa20.27■□□□□ 0.84
ATG4B-221ENST00000483778 RDM1Q8NG50 284 aa20.27■□□□□ 0.84
ATG4B-221ENST00000483778 C22orf23Q9BZE7 217 aa20.27■□□□□ 0.84
ATG4B-221ENST00000483778 TMEM117Q9H0C3 514 aa20.27■□□□□ 0.84
ATG4B-221ENST00000483778 VAV3Q9UKW4 847 aa20.27■□□□□ 0.84
ATG4B-221ENST00000483778 FAM50BQ9Y247 325 aa20.27■□□□□ 0.84
ATG4B-221ENST00000483778 A0A087WZ62 844 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 FSCN2O14926 492 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 PFKFB2O60825 505 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 ZSCAN20P17040 1043 aaPredicted RBP20.26■□□□□ 0.83
ATG4B-221ENST00000483778 NPEPPSP55786 919 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 LONRF3Q496Y0 759 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 GALNT17Q6IS24 598 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 MOXD1Q6UVY6 613 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 FAM43BQ6ZT52 329 aaPredicted RBP20.26■□□□□ 0.83
ATG4B-221ENST00000483778 KRT25Q7Z3Z0 450 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 NLRP7Q8WX94 980 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 HAS1Q92839 578 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 FDXACB1Q9BRP7 624 aaPredicted RBP20.26■□□□□ 0.83
ATG4B-221ENST00000483778 SLKQ9H2G2 1235 aaPredicted RBP20.26■□□□□ 0.83
ATG4B-221ENST00000483778 TLR9Q9NR96 1032 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 AAASQ9NRG9 546 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 TECTAO75443 2155 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 MYO10Q9HD67 2058 aa20.26■□□□□ 0.83
ATG4B-221ENST00000483778 MUC6Q6W4X9 2439 aa20.25■□□□□ 0.83
ATG4B-221ENST00000483778 DCXO43602 365 aa20.25■□□□□ 0.83
ATG4B-221ENST00000483778 FDPSP14324 419 aaKnown RBP20.25■□□□□ 0.83
ATG4B-221ENST00000483778 PLA2G5P39877 138 aa20.25■□□□□ 0.83
ATG4B-221ENST00000483778 CPLX2Q6PUV4 134 aaKnown RBP20.25■□□□□ 0.83
ATG4B-221ENST00000483778 KCNT2Q6UVM3 1135 aa20.25■□□□□ 0.83
ATG4B-221ENST00000483778 NECAB1Q8N987 351 aa20.25■□□□□ 0.83
ATG4B-221ENST00000483778 SMRP1Q8NCR6 262 aa20.25■□□□□ 0.83
ATG4B-221ENST00000483778 HELQQ8TDG4 1101 aa20.25■□□□□ 0.83
ATG4B-221ENST00000483778 SCLT1Q96NL6 688 aa20.25■□□□□ 0.83
ATG4B-221ENST00000483778 KCNMB3Q9NPA1 279 aa20.25■□□□□ 0.83
ATG4B-221ENST00000483778 SUCLA2Q9P2R7 463 aaPredicted RBP20.25■□□□□ 0.83
ATG4B-221ENST00000483778 ARID2Q68CP9 1835 aa20.25■□□□□ 0.83
ATG4B-221ENST00000483778 A0A0U1RQF3 1178 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 MEIS3P2A8K0S8 358 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 HIDE1A8MVS5 230 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 ZBTB39O15060 712 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 MAFO75444 373 aaPredicted RBP20.24■□□□□ 0.83
ATG4B-221ENST00000483778 LARGE1O95461 756 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 ALADP13716 330 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 LAG3P18627 525 aa20.24■□□□□ 0.83
ATG4B-221ENST00000483778 UBE3AQ05086 875 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms