RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TBC1D5Q92609 795 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 ANKS1AQ92625 1134 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 KAT2BQ92831 832 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 TGS1Q96RS0 853 aaKnown RBP6.81□□□□□ -1.32
CSDE1-207ENST00000483407 RAD9AQ99638 391 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 UBAC1Q9BSL1 405 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 ALG1Q9BT22 464 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 AMNQ9BXJ7 453 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 KRT23Q9C075 422 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 ZCCHC2Q9C0B9 1178 aaKnown RBP6.81□□□□□ -1.32
CSDE1-207ENST00000483407 LNPKQ9C0E8 428 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 CPVLQ9H3G5 476 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 CNNM2Q9H8M5 875 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 VAT1LQ9HCJ6 419 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 METTL5Q9NRN9 209 aaKnown RBP6.81□□□□□ -1.32
CSDE1-207ENST00000483407 DIAPH3Q9NSV4 1193 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 HDAC6Q9UBN7 1215 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 CTNNA3Q9UI47 895 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 DDX41Q9UJV9 622 aaKnown RBP6.81□□□□□ -1.32
CSDE1-207ENST00000483407 EMSYQ7Z589 1322 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 GIPC1O14908 333 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 NBNO60934 754 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 PHACTR2O75167 634 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 PPFIA4O75335 1185 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 F2P00734 622 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 THBS1P07996 1170 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 CTSHP09668 335 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 DEFB103AP81534 67 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.8□□□□□ -1.32
CSDE1-207ENST00000483407 IFIT1BQ5T764 474 aaKnown RBP6.8□□□□□ -1.32
CSDE1-207ENST00000483407 FIGNL1Q6PIW4 674 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 CWC27Q6UX04 472 aaKnown RBP6.8□□□□□ -1.32
CSDE1-207ENST00000483407 SAMD3Q8N6K7 520 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 ENAHQ8N8S7 591 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-207ENST00000483407 GDPD5Q8WTR4 605 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 DHX38Q92620 1227 aaKnown RBP6.8□□□□□ -1.32
CSDE1-207ENST00000483407 SPATA33Q96N06 139 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 CTAGE1Q96RT6 745 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 DSCC1Q9BVC3 393 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 CHRDQ9H2X0 955 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 JMJD4Q9H9V9 463 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 ATP13A2Q9NQ11 1180 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 PXMP2Q9NR77 195 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 MAP3K20Q9NYL2 800 aaKnown RBP6.8□□□□□ -1.32
CSDE1-207ENST00000483407 COL20A1Q9P218 1284 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 MTUS1Q9ULD2 1270 aa6.8□□□□□ -1.32
CSDE1-207ENST00000483407 MYO9BQ13459 2157 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 SCN10AQ9Y5Y9 1956 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 LCHNA4D1U4 455 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 HAS3O00219 553 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 EFSO43281 561 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 MAN1A2O60476 641 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 LPXNO60711 386 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 AMHP03971 560 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 ZNF286BP0CG31 522 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 FAM157BP0CG42 384 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 TGFB3P10600 412 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 MYCLP12524 364 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-207ENST00000483407 HSD17B4P51659 736 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 ERVK-21P61565 698 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 FANCCQ00597 558 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 UBAP2LQ14157 1087 aaKnown RBP6.79□□□□□ -1.32
CSDE1-207ENST00000483407 GPNMBQ14956 572 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 TMEM31Q5JXX7 168 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 CELF3Q5SZQ8 465 aaKnown RBP6.79□□□□□ -1.32
CSDE1-207ENST00000483407 ZNF618Q5T7W0 954 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 FAM117BQ6P1L5 589 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 TMCO2Q7Z6W1 182 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-207ENST00000483407 CHD1LQ86WJ1 897 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 MYOCDQ8IZQ8 938 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 C1orf127Q8N9H9 656 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 EPS8L3Q8TE67 593 aaKnown RBP6.79□□□□□ -1.32
CSDE1-207ENST00000483407 PMEPA1Q969W9 287 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 CRELD1Q96HD1 420 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 PDCD2LQ9BRP1 358 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 RWDD1Q9H446 243 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-207ENST00000483407 EPHX3Q9H6B9 360 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 SUGCTQ9HAC7 445 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 MLXIPQ9HAP2 919 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 ABI2Q9NYB9 513 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-207ENST00000483407 ZSWIM5Q9P217 1185 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 CNTN3Q9P232 1028 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 DACH1Q9UI36 760 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 INSL6Q9Y581 213 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 PCDHA1Q9Y5I3 950 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 CHD9Q3L8U1 2897 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 CHD7Q9P2D1 2997 aa6.79□□□□□ -1.32
CSDE1-207ENST00000483407 PIEZO1Q92508 2521 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 XIRP2A4UGR9 3374 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 ERICH2A1L162 156 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 C17orf102A2RUQ5 167 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 SLC35F4A4IF30 521 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 LINC01553A4QN01 128 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 RSPH10B2B2RC85 870 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 KLRF2D3W0D1 207 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 GCOM1H8Y6P7 765 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-207ENST00000483407 NOP56O00567 594 aaKnown RBP6.78□□□□□ -1.32
CSDE1-207ENST00000483407 ZBTB5O15062 677 aa6.78□□□□□ -1.32
CSDE1-207ENST00000483407 ATXN7O15265 892 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-207ENST00000483407 GGPS1O95749 300 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms