RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 NFX1Q12986 1120 aaKnown RBP18.46■□□□□ 0.55
HMGN1-214ENST00000482733 MXD4Q14582 209 aaPredicted RBP18.46■□□□□ 0.55
HMGN1-214ENST00000482733 ECM1Q16610 540 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 HYIQ5T013 277 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 MCPH1Q8NEM0 835 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 TMEM40Q8WWA1 233 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 PRPF31Q8WWY3 499 aaKnown RBP18.46■□□□□ 0.55
HMGN1-214ENST00000482733 TMEM143Q96AN5 459 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 CDK5RAP3Q96JB5 506 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 PBX4Q9BYU1 374 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 ERVK-5Q9HDB9 667 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 XPNPEP1Q9NQW7 623 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 ST3GAL5Q9UNP4 418 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 PCDHA11Q9Y5I1 949 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 WDR81Q562E7 1941 aa18.46■□□□□ 0.55
HMGN1-214ENST00000482733 A0A087WWV3 80 aa18.45■□□□□ 0.54
HMGN1-214ENST00000482733 USO1O60763 962 aaKnown RBP18.45■□□□□ 0.54
HMGN1-214ENST00000482733 DNAJB2P25686 324 aa18.45■□□□□ 0.54
HMGN1-214ENST00000482733 NASPP49321 788 aaPredicted RBP18.45■□□□□ 0.54
HMGN1-214ENST00000482733 DEFB103AP81534 67 aa18.45■□□□□ 0.54
HMGN1-214ENST00000482733 CEBPZQ03701 1054 aaKnown RBP18.45■□□□□ 0.54
HMGN1-214ENST00000482733 SLC39A14Q15043 492 aa18.45■□□□□ 0.54
HMGN1-214ENST00000482733 ATL3Q6DD88 541 aa18.45■□□□□ 0.54
HMGN1-214ENST00000482733 PADI6Q6TGC4 694 aa18.45■□□□□ 0.54
HMGN1-214ENST00000482733 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.45■□□□□ 0.544e-8■□□□□ 11
HMGN1-214ENST00000482733 CABP7Q86V35 215 aa18.45■□□□□ 0.54
HMGN1-214ENST00000482733 FAM228AQ86W67 206 aa18.45■□□□□ 0.54
HMGN1-214ENST00000482733 BMP2KQ9NSY1 1161 aaPredicted RBP18.45■□□□□ 0.54
HMGN1-214ENST00000482733 SRPRBQ9Y5M8 271 aaKnown RBP18.45■□□□□ 0.54
HMGN1-214ENST00000482733 TET1Q8NFU7 2136 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 LAMA2P24043 3122 aaKnown RBP18.44■□□□□ 0.54
HMGN1-214ENST00000482733 A0A087WZ62 844 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-214ENST00000482733 ENPP3O14638 875 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 GJB5O95377 273 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 EYA4O95677 639 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 CYP11B2P19099 503 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 ARL2P36404 184 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 LAMTOR4Q0VGL1 99 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 TFDP1Q14186 410 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 ZRSR1Q15695 479 aaKnown RBP18.44■□□□□ 0.54
HMGN1-214ENST00000482733 ZNF697Q5TEC3 545 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 FOXD4L5Q5VV16 416 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-214ENST00000482733 MYOCDQ8IZQ8 938 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 FOXD4L4Q8WXT5 416 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-214ENST00000482733 TOP1MTQ969P6 601 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 TIFAQ96CG3 184 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 CALML4Q96GE6 196 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 NLRP4Q96MN2 994 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 FDXACB1Q9BRP7 624 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-214ENST00000482733 ZBED2Q9BTP6 218 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 TSPYL2Q9H2G4 693 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-214ENST00000482733 BHMT2Q9H2M3 363 aa18.44■□□□□ 0.54
HMGN1-214ENST00000482733 RNF216Q9NWF9 866 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-214ENST00000482733 FBXO2Q9UK22 296 aaPredicted RBP18.44■□□□□ 0.54
HMGN1-214ENST00000482733 TLL1O43897 1013 aa18.43■□□□□ 0.54
HMGN1-214ENST00000482733 YEATS4O95619 227 aa18.43■□□□□ 0.54
HMGN1-214ENST00000482733 BRD1O95696 1058 aa18.43■□□□□ 0.54
HMGN1-214ENST00000482733 SFPQP23246 707 aaKnown RBP eCLIP18.43■□□□□ 0.54
HMGN1-214ENST00000482733 MARCKSP29966 332 aaPredicted RBP18.43■□□□□ 0.54
HMGN1-214ENST00000482733 POU5F1BQ06416 359 aa18.43■□□□□ 0.54
HMGN1-214ENST00000482733 PKP1Q13835 747 aa18.43■□□□□ 0.54
HMGN1-214ENST00000482733 STK38Q15208 465 aa18.43■□□□□ 0.54
HMGN1-214ENST00000482733 SRGAP1Q7Z6B7 1085 aa18.43■□□□□ 0.54
HMGN1-214ENST00000482733 KSR1Q8IVT5 923 aa18.43■□□□□ 0.54
HMGN1-214ENST00000482733 KRI1Q8N9T8 703 aaKnown RBP18.43■□□□□ 0.54
HMGN1-214ENST00000482733 ZNF668Q96K58 619 aaPredicted RBP18.43■□□□□ 0.54
HMGN1-214ENST00000482733 RAD9AQ99638 391 aa18.43■□□□□ 0.54
HMGN1-214ENST00000482733 TMX1Q9H3N1 280 aa18.43■□□□□ 0.54
HMGN1-214ENST00000482733 C1orf112Q9NSG2 853 aa18.43■□□□□ 0.54
HMGN1-214ENST00000482733 DENND3A2RUS2 1198 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 E9PMD0 336 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 SRGAP2CP0DJJ0 459 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 ZSCAN20P17040 1043 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-214ENST00000482733 PBX2P40425 430 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 PHKA2P46019 1235 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 RABGGTBP53611 331 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 PCBP1Q15365 356 aaKnown RBP eCLIP18.42■□□□□ 0.54
HMGN1-214ENST00000482733 TMEM119Q4V9L6 283 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 RNF149Q8NC42 400 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 LINC00301Q8NCQ3 95 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 PNMA5Q96PV4 448 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 CCSER1Q9C0I3 900 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 POLR3FQ9H1D9 316 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-214ENST00000482733 IFT122Q9HBG6 1241 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 CFAP45Q9UL16 551 aa18.42■□□□□ 0.54
HMGN1-214ENST00000482733 SPTLC2O15270 562 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 PPP6R2O75170 966 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 TXLNAP40222 546 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 GRIN1Q05586 938 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 GRB10Q13322 594 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 FAM102BQ5T8I3 360 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 RTN4RL1Q86UN2 441 aaPredicted RBP18.41■□□□□ 0.54
HMGN1-214ENST00000482733 RASSF8Q8NHQ8 419 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 LINC01599Q8WXQ3 324 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 TIPINQ9BVW5 301 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 NFKBIZQ9BYH8 718 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 CSRNP2Q9H175 543 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 SLC28A3Q9HAS3 691 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 CHST12Q9NRB3 414 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms