RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 GRXCR1A8MXD5 290 aa23.27■■□□□ 1.32
SEC13-217ENST00000482647 ASAP2O43150 1006 aa23.27■■□□□ 1.32
SEC13-217ENST00000482647 AMHP03971 560 aa23.27■■□□□ 1.32
SEC13-217ENST00000482647 NFX1Q12986 1120 aaKnown RBP23.27■■□□□ 1.32
SEC13-217ENST00000482647 PADI6Q6TGC4 694 aa23.27■■□□□ 1.32
SEC13-217ENST00000482647 ZNF410Q86VK4 478 aa23.27■■□□□ 1.32
SEC13-217ENST00000482647 LRCH3Q96II8 777 aa23.27■■□□□ 1.32
SEC13-217ENST00000482647 CDK5RAP3Q96JB5 506 aa23.27■■□□□ 1.32
SEC13-217ENST00000482647 GCOM2Q9BZD3 368 aaPredicted RBP23.27■■□□□ 1.32
SEC13-217ENST00000482647 NT5C3AQ9H0P0 336 aa23.27■■□□□ 1.32
SEC13-217ENST00000482647 ST3GAL5Q9UNP4 418 aa23.27■■□□□ 1.32
SEC13-217ENST00000482647 SRPRBQ9Y5M8 271 aaKnown RBP23.27■■□□□ 1.32
SEC13-217ENST00000482647 COL4A3BPQ9Y5P4 624 aa23.27■■□□□ 1.32
SEC13-217ENST00000482647 TET1Q8NFU7 2136 aa23.27■■□□□ 1.32
SEC13-217ENST00000482647 RBAK-RBAKDNI3L0D1 243 aa23.26■■□□□ 1.31
SEC13-217ENST00000482647 USO1O60763 962 aaKnown RBP23.26■■□□□ 1.31
SEC13-217ENST00000482647 NASPP49321 788 aaPredicted RBP23.26■■□□□ 1.31
SEC13-217ENST00000482647 MXD4Q14582 209 aaPredicted RBP23.26■■□□□ 1.31
SEC13-217ENST00000482647 STK38Q15208 465 aa23.26■■□□□ 1.31
SEC13-217ENST00000482647 GPR153Q6NV75 609 aa23.26■■□□□ 1.31
SEC13-217ENST00000482647 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.26■■□□□ 1.31
SEC13-217ENST00000482647 CABP7Q86V35 215 aa23.26■■□□□ 1.31
SEC13-217ENST00000482647 HERC6Q8IVU3 1022 aa23.26■■□□□ 1.31
SEC13-217ENST00000482647 MCPH1Q8NEM0 835 aa23.26■■□□□ 1.31
SEC13-217ENST00000482647 ZNF668Q96K58 619 aaPredicted RBP23.26■■□□□ 1.31
SEC13-217ENST00000482647 BHMT2Q9H2M3 363 aa23.26■■□□□ 1.31
SEC13-217ENST00000482647 ERVK-5Q9HDB9 667 aa23.26■■□□□ 1.31
SEC13-217ENST00000482647 XPNPEP1Q9NQW7 623 aa23.26■■□□□ 1.31
SEC13-217ENST00000482647 TFIP11Q9UBB9 837 aaKnown RBP23.26■■□□□ 1.31
SEC13-217ENST00000482647 FBXO2Q9UK22 296 aaPredicted RBP23.26■■□□□ 1.31
SEC13-217ENST00000482647 A0A087WZ62 844 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 EYA4O95677 639 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 BRD1O95696 1058 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 DARSP14868 501 aaKnown RBP23.25■■□□□ 1.31
SEC13-217ENST00000482647 GRIN1Q05586 938 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 LAMTOR4Q0VGL1 99 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 RAB30Q15771 203 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 FOXD4L6Q3SYB3 417 aaPredicted RBP23.25■■□□□ 1.31
SEC13-217ENST00000482647 HYIQ5T013 277 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 ATL3Q6DD88 541 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 FOXD4L3Q6VB84 417 aaPredicted RBP23.25■■□□□ 1.31
SEC13-217ENST00000482647 KSR1Q8IVT5 923 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 CALML4Q96GE6 196 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 NLRP4Q96MN2 994 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 FDXACB1Q9BRP7 624 aaPredicted RBP23.25■■□□□ 1.31
SEC13-217ENST00000482647 INO80BQ9C086 356 aaPredicted RBP23.25■■□□□ 1.31
SEC13-217ENST00000482647 CSRNP2Q9H175 543 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 DAXXQ9UER7 740 aaPredicted RBP23.25■■□□□ 1.31
SEC13-217ENST00000482647 MSRAQ9UJ68 235 aa23.25■■□□□ 1.31
SEC13-217ENST00000482647 E9PMD0 336 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 ENPP3O14638 875 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 SRGAP2CP0DJJ0 459 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 CYP11B2P19099 503 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 ARL2P36404 184 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 DEFB103AP81534 67 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 FAM228AQ86W67 206 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 MYOCDQ8IZQ8 938 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 KRI1Q8N9T8 703 aaKnown RBP23.24■■□□□ 1.31
SEC13-217ENST00000482647 LINC00301Q8NCQ3 95 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 PNMA5Q96PV4 448 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 ZBED2Q9BTP6 218 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 PBX4Q9BYU1 374 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 CFAP45Q9UL16 551 aa23.24■■□□□ 1.31
SEC13-217ENST00000482647 EVPLQ92817 2033 aa23.23■■□□□ 1.31
SEC13-217ENST00000482647 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.23■■□□□ 1.31
SEC13-217ENST00000482647 SPTLC2O15270 562 aa23.23■■□□□ 1.31
SEC13-217ENST00000482647 YEATS4O95619 227 aa23.23■■□□□ 1.31
SEC13-217ENST00000482647 RABGGTBP53611 331 aa23.23■■□□□ 1.31
SEC13-217ENST00000482647 GRB10Q13322 594 aa23.23■■□□□ 1.31
SEC13-217ENST00000482647 TFDP1Q14186 410 aa23.23■■□□□ 1.31
SEC13-217ENST00000482647 RASSF8Q8NHQ8 419 aa23.23■■□□□ 1.31
SEC13-217ENST00000482647 PLIN2Q99541 437 aa23.23■■□□□ 1.31
SEC13-217ENST00000482647 TMX1Q9H3N1 280 aa23.23■■□□□ 1.31
SEC13-217ENST00000482647 PCDHA11Q9Y5I1 949 aa23.23■■□□□ 1.31
SEC13-217ENST00000482647 PBX2P40425 430 aa23.22■■□□□ 1.31
SEC13-217ENST00000482647 FAM102BQ5T8I3 360 aa23.22■■□□□ 1.31
SEC13-217ENST00000482647 MAEAQ7L5Y9 396 aa23.22■■□□□ 1.31
SEC13-217ENST00000482647 RNF149Q8NC42 400 aa23.22■■□□□ 1.31
SEC13-217ENST00000482647 CCSER1Q9C0I3 900 aa23.22■■□□□ 1.31
SEC13-217ENST00000482647 POLR3FQ9H1D9 316 aaPredicted RBP23.22■■□□□ 1.31
SEC13-217ENST00000482647 TSPYL2Q9H2G4 693 aaPredicted RBP23.22■■□□□ 1.31
SEC13-217ENST00000482647 ZDHHC9Q9Y397 364 aa23.22■■□□□ 1.31
SEC13-217ENST00000482647 SZT2Q5T011 3432 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 DENND3A2RUS2 1198 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 PPP6R2O75170 966 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 GJB5O95377 273 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 SFPQP23246 707 aaKnown RBP eCLIP23.21■■□□□ 1.31
SEC13-217ENST00000482647 DNAJB2P25686 324 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 TMEM119Q4V9L6 283 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 KCNK18Q7Z418 384 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 SRGAP1Q7Z6B7 1085 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 TMCO2Q7Z6W1 182 aaPredicted RBP23.21■■□□□ 1.31
SEC13-217ENST00000482647 RTN4RL1Q86UN2 441 aaPredicted RBP23.21■■□□□ 1.31
SEC13-217ENST00000482647 TOP1MTQ969P6 601 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 TIFAQ96CG3 184 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 CLIC6Q96NY7 704 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 IFT122Q9HBG6 1241 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 ATP6V1DQ9Y5K8 247 aa23.21■■□□□ 1.31
SEC13-217ENST00000482647 TLL1O43897 1013 aa23.2■■□□□ 1.3
SEC13-217ENST00000482647 CSDE1O75534 798 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms