RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 UBR7Q8N806 425 aa6.91□□□□□ -1.3
PTPN12-211ENST00000481154 PUF60Q9UHX1 559 aaKnown RBP6.91□□□□□ -1.3
PTPN12-211ENST00000481154 RAD17O75943 681 aa6.9□□□□□ -1.3
PTPN12-211ENST00000481154 FSHBP01225 129 aa6.9□□□□□ -1.3
PTPN12-211ENST00000481154 AMHP03971 560 aa6.9□□□□□ -1.3
PTPN12-211ENST00000481154 COMTP21964 271 aa6.9□□□□□ -1.3
PTPN12-211ENST00000481154 CNGA1P29973 690 aa6.9□□□□□ -1.3
PTPN12-211ENST00000481154 SLC6A3Q01959 620 aa6.9□□□□□ -1.3
PTPN12-211ENST00000481154 Q8N1X5 172 aa6.9□□□□□ -1.3
PTPN12-211ENST00000481154 OR10A2Q9H208 303 aa6.9□□□□□ -1.3
PTPN12-211ENST00000481154 PCIF1Q9H4Z3 704 aa6.9□□□□□ -1.3
PTPN12-211ENST00000481154 ZNF891A8MT65 544 aaPredicted RBP6.89□□□□□ -1.31
PTPN12-211ENST00000481154 F2P00734 622 aa6.89□□□□□ -1.31
PTPN12-211ENST00000481154 DSG1Q02413 1049 aa6.89□□□□□ -1.31
PTPN12-211ENST00000481154 ADAM15Q13444 863 aa6.89□□□□□ -1.31
PTPN12-211ENST00000481154 PRKD1Q15139 912 aaPredicted RBP6.89□□□□□ -1.31
PTPN12-211ENST00000481154 CT47A1Q5JQC4 288 aaPredicted RBP6.89□□□□□ -1.31
PTPN12-211ENST00000481154 DDX46Q7L014 1031 aaKnown RBP6.89□□□□□ -1.31
PTPN12-211ENST00000481154 NXPE1Q8N323 547 aa6.89□□□□□ -1.31
PTPN12-211ENST00000481154 FOXB1Q99853 325 aa6.89□□□□□ -1.31
PTPN12-211ENST00000481154 VPS11Q9H270 941 aa6.89□□□□□ -1.31
PTPN12-211ENST00000481154 ZKSCAN5Q9Y2L8 839 aa6.89□□□□□ -1.31
PTPN12-211ENST00000481154 H7C1D1 291 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 AKAP8O43823 692 aaKnown RBP6.88□□□□□ -1.31
PTPN12-211ENST00000481154 GAS7O60861 476 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 PRLP01236 227 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 ACO1P21399 889 aaKnown RBP6.88□□□□□ -1.31
PTPN12-211ENST00000481154 TACR2P21452 398 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 PTX3P26022 381 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-211ENST00000481154 FNTBP49356 437 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 SCNN1BP51168 640 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 HGFACQ04756 655 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 ACAP1Q15027 740 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 DHCR24Q15392 516 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 Q6ZSN1 163 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 GPR135Q8IZ08 494 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 KIAA1958Q8N8K9 716 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 SLC16A11Q8NCK7 471 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 OR2W6PQ8NHA6 318 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 ZNF747Q9BV97 191 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 SCAND2PQ9GZW5 306 aaPredicted RBP6.88□□□□□ -1.31
PTPN12-211ENST00000481154 SEMA4AQ9H3S1 761 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTPN12-211ENST00000481154 TESMINQ9Y4I5 508 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 SLC30A1Q9Y6M5 507 aa6.88□□□□□ -1.31
PTPN12-211ENST00000481154 ATP2A2P16615 1042 aaKnown RBP6.87□□□□□ -1.31
PTPN12-211ENST00000481154 SLC9A1P19634 815 aa6.87□□□□□ -1.31
PTPN12-211ENST00000481154 MSX2P35548 267 aaPredicted RBP6.87□□□□□ -1.31
PTPN12-211ENST00000481154 MAP3K12Q12852 859 aa6.87□□□□□ -1.31
PTPN12-211ENST00000481154 ZNF174Q15697 407 aa6.87□□□□□ -1.31
PTPN12-211ENST00000481154 CRIP3Q6Q6R5 217 aa6.87□□□□□ -1.31
PTPN12-211ENST00000481154 POLNQ7Z5Q5 900 aa6.87□□□□□ -1.31
PTPN12-211ENST00000481154 STRA8Q7Z7C7 330 aa6.87□□□□□ -1.31
PTPN12-211ENST00000481154 AFAP1L2Q8N4X5 818 aa6.87□□□□□ -1.31
PTPN12-211ENST00000481154 TMEM176AQ96HP8 235 aa6.87□□□□□ -1.31
PTPN12-211ENST00000481154 ACSS2Q9NR19 701 aa6.87□□□□□ -1.31
PTPN12-211ENST00000481154 UBA6A0AVT1 1052 aaPredicted RBP6.86□□□□□ -1.31
PTPN12-211ENST00000481154 ANTXR2P58335 489 aa6.86□□□□□ -1.31
PTPN12-211ENST00000481154 ROM1Q03395 351 aa6.86□□□□□ -1.31
PTPN12-211ENST00000481154 FOXL1Q12952 345 aa6.86□□□□□ -1.31
PTPN12-211ENST00000481154 SART3Q15020 963 aaKnown RBP6.86□□□□□ -1.31
PTPN12-211ENST00000481154 PRAMEF9Q5VWM5 478 aa6.86□□□□□ -1.31
PTPN12-211ENST00000481154 CREB3L3Q68CJ9 461 aa6.86□□□□□ -1.31
PTPN12-211ENST00000481154 SLFN12LQ6IEE8 588 aa6.86□□□□□ -1.31
PTPN12-211ENST00000481154 ZNF808Q8N4W9 903 aaPredicted RBP6.86□□□□□ -1.31
PTPN12-211ENST00000481154 SMC1BQ8NDV3 1235 aa6.86□□□□□ -1.31
PTPN12-211ENST00000481154 OR5AN1Q8NGI8 311 aa6.86□□□□□ -1.31
PTPN12-211ENST00000481154 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
PTPN12-211ENST00000481154 THG1LQ9NWX6 298 aaKnown RBP6.86□□□□□ -1.31
PTPN12-211ENST00000481154 H2AFY2Q9P0M6 372 aaPredicted RBP6.86□□□□□ -1.31
PTPN12-211ENST00000481154 SLC26A4O43511 780 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 MAFO75444 373 aaPredicted RBP6.85□□□□□ -1.31
PTPN12-211ENST00000481154 CYP17A1P05093 508 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
PTPN12-211ENST00000481154 RPS19P39019 145 aaKnown RBP6.85□□□□□ -1.31
PTPN12-211ENST00000481154 IL2P60568 153 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 STRN3Q13033 797 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 NRN1LQ496H8 165 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 USP39Q53GS9 565 aaKnown RBP6.85□□□□□ -1.31
PTPN12-211ENST00000481154 SHCBP1Q8NEM2 672 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 CHTF18Q8WVB6 975 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 EXTL1Q92935 676 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 E2F7Q96AV8 911 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 MAML3Q96JK9 1138 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 C16orf92Q96LL3 132 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 TUBGCP5Q96RT8 1024 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 ELF4Q99607 663 aaPredicted RBP6.85□□□□□ -1.31
PTPN12-211ENST00000481154 AGO3Q9H9G7 860 aaKnown RBP6.85□□□□□ -1.31
PTPN12-211ENST00000481154 OXSMQ9NWU1 459 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 PLA2G3Q9NZ20 509 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 SAE1Q9UBE0 346 aaPredicted RBP6.85□□□□□ -1.31
PTPN12-211ENST00000481154 COL4A3BPQ9Y5P4 624 aa6.85□□□□□ -1.31
PTPN12-211ENST00000481154 BPIP17213 487 aa6.84□□□□□ -1.31
PTPN12-211ENST00000481154 NCLP19338 710 aaKnown RBP6.84□□□□□ -1.31
PTPN12-211ENST00000481154 ADCYAP1R1P41586 468 aa6.84□□□□□ -1.31
PTPN12-211ENST00000481154 ATP2C1P98194 919 aaPredicted RBP6.84□□□□□ -1.31
PTPN12-211ENST00000481154 SAFB2Q14151 953 aaKnown RBP eCLIP6.84□□□□□ -1.31
PTPN12-211ENST00000481154 PTPROQ16827 1216 aa6.84□□□□□ -1.31
PTPN12-211ENST00000481154 TTC38Q5R3I4 469 aa6.84□□□□□ -1.31
PTPN12-211ENST00000481154 ESRP1Q6NXG1 681 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms