RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 ST3GAL5Q9UNP4 418 aa13.65□□□□□ -0.22
PTPRF-213ENST00000481019 PCDHA11Q9Y5I1 949 aa13.65□□□□□ -0.22
PTPRF-213ENST00000481019 A0A087WZ62 844 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 M0QZ92 97 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 DKC1O60832 514 aaKnown RBP eCLIP13.64□□□□□ -0.23
PTPRF-213ENST00000481019 RPS6KA5O75582 802 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 UPP2O95045 317 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 GJB5O95377 273 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 BRD1O95696 1058 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 RPLP2P05387 115 aaKnown RBP13.64□□□□□ -0.23
PTPRF-213ENST00000481019 CA3P07451 260 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 TMOD1P28289 359 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 CCT6AP40227 531 aaKnown RBP13.64□□□□□ -0.23
PTPRF-213ENST00000481019 NFX1Q12986 1120 aaKnown RBP13.64□□□□□ -0.23
PTPRF-213ENST00000481019 PAK2Q13177 524 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 PDIA5Q14554 519 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 GRIN2CQ14957 1233 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 PTPAQ15257 358 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 DTHD1Q6ZMT9 781 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 OTUD6AQ7L8S5 288 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 RHPN2Q8IUC4 686 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 CRIPAKQ8N1N5 446 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 ASAP3Q8TDY4 903 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 LRRC15Q8TF66 581 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 PRPF31Q8WWY3 499 aaKnown RBP13.64□□□□□ -0.23
PTPRF-213ENST00000481019 APBB2Q92870 758 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 PNMA5Q96PV4 448 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 MAP7D2Q96T17 732 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 FDXACB1Q9BRP7 624 aaPredicted RBP13.64□□□□□ -0.23
PTPRF-213ENST00000481019 POLD4Q9HCU8 107 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 GPRC5CQ9NQ84 441 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 SQORQ9Y6N5 450 aa13.64□□□□□ -0.23
PTPRF-213ENST00000481019 MYH15Q9Y2K3 1946 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 VWA3AA6NCI4 1184 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 EPOPA6NHQ4 379 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 LAD1O00515 517 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 USO1O60763 962 aaKnown RBP13.63□□□□□ -0.23
PTPRF-213ENST00000481019 SLC34A2O95436 690 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 AMHP03971 560 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 ZSCAN22P10073 491 aaPredicted RBP13.63□□□□□ -0.23
PTPRF-213ENST00000481019 DARSP14868 501 aaKnown RBP13.63□□□□□ -0.23
PTPRF-213ENST00000481019 RFC5P40937 340 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 POLGP54098 1239 aaPredicted RBP13.63□□□□□ -0.23
PTPRF-213ENST00000481019 DSC3Q14574 896 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 RAB30Q15771 203 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 ZNF697Q5TEC3 545 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 SNX29Q8TEQ0 813 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 NLRP7Q8WX94 980 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 TOP1MTQ969P6 601 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 ZNF576Q9H609 170 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 MINDY3Q9H8M7 445 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 KIAA1024Q9UPX6 916 aa13.63□□□□□ -0.23
PTPRF-213ENST00000481019 SPTBN5Q9NRC6 3674 aaKnown RBP13.62□□□□□ -0.23
PTPRF-213ENST00000481019 E9PMD0 336 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 TLL1O43897 1013 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 EFCAB14O75071 495 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 EIF4BP23588 611 aaKnown RBP13.62□□□□□ -0.23
PTPRF-213ENST00000481019 GATMP50440 423 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 TAP1Q03518 808 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 CEBPZQ03701 1054 aaKnown RBP13.62□□□□□ -0.23
PTPRF-213ENST00000481019 LAMTOR4Q0VGL1 99 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 GRB10Q13322 594 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 CSPP1Q1MSJ5 1256 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 CLEC17AQ6ZS10 378 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 MAEAQ7L5Y9 396 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 USP38Q8NB14 1042 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 SLC7A3Q8WY07 619 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 NLRP4Q96MN2 994 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 NACC1Q96RE7 527 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 USP28Q96RU2 1077 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 PLIN2Q99541 437 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 CDX2Q99626 313 aaPredicted RBP13.62□□□□□ -0.23
PTPRF-213ENST00000481019 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
PTPRF-213ENST00000481019 CERS4Q9HA82 394 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 IFT122Q9HBG6 1241 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 DDX19AQ9NUU7 478 aaKnown RBP13.62□□□□□ -0.23
PTPRF-213ENST00000481019 DBR1Q9UK59 544 aaKnown RBP13.62□□□□□ -0.23
PTPRF-213ENST00000481019 COL4A3BPQ9Y5P4 624 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 TTC3P53804 2025 aa13.62□□□□□ -0.23
PTPRF-213ENST00000481019 RFXAPO00287 272 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 SRGAP2CP0DJJ0 459 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 XRCC6P12956 609 aaKnown RBP eCLIP13.61□□□□□ -0.23
PTPRF-213ENST00000481019 IBSPP21815 317 aaPredicted RBP13.61□□□□□ -0.23
PTPRF-213ENST00000481019 GLRA2P23416 452 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 MARCKSP29966 332 aaPredicted RBP13.61□□□□□ -0.23
PTPRF-213ENST00000481019 ARL2P36404 184 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 DNM2P50570 870 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 HTRA4P83105 476 aaPredicted RBP13.61□□□□□ -0.23
PTPRF-213ENST00000481019 PPP2R2DQ66LE6 453 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 ATL3Q6DD88 541 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 USP49Q70CQ1 688 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 ERMNQ8TAM6 284 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 MYLIPQ8WY64 445 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 BSNDQ8WZ55 320 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 CHAMP1Q96JM3 812 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 SCLT1Q96NL6 688 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 RAD9AQ99638 391 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 MTRQ99707 1265 aa13.61□□□□□ -0.23
PTPRF-213ENST00000481019 ADAM2Q99965 735 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms