RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 NLRP4Q96MN2 994 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 IFIH1Q9BYX4 1025 aaKnown RBP16.85■□□□□ 0.29
ABCF3-213ENST00000480539 NT5C3AQ9H0P0 336 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 CFAP45Q9UL16 551 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 DNM3Q9UQ16 869 aa16.85■□□□□ 0.29
ABCF3-213ENST00000480539 GAS2O43903 313 aaKnown RBP16.84■□□□□ 0.29
ABCF3-213ENST00000480539 SSBP05455 408 aaKnown RBP eCLIP16.84■□□□□ 0.29
ABCF3-213ENST00000480539 CD52P31358 61 aa16.84■□□□□ 0.29
ABCF3-213ENST00000480539 ME1P48163 572 aa16.84■□□□□ 0.29
ABCF3-213ENST00000480539 PADI6Q6TGC4 694 aa16.84■□□□□ 0.29
ABCF3-213ENST00000480539 TSHZ1Q6ZSZ6 1077 aa16.84■□□□□ 0.29
ABCF3-213ENST00000480539 KSR1Q8IVT5 923 aa16.84■□□□□ 0.29
ABCF3-213ENST00000480539 EXOC8Q8IYI6 725 aa16.84■□□□□ 0.29
ABCF3-213ENST00000480539 DBF4BQ8NFT6 615 aa16.84■□□□□ 0.29
ABCF3-213ENST00000480539 PSPC1Q8WXF1 523 aaKnown RBP16.84■□□□□ 0.29
ABCF3-213ENST00000480539 POLR3FQ9H1D9 316 aaPredicted RBP16.84■□□□□ 0.29
ABCF3-213ENST00000480539 ADAMTS10Q9H324 1103 aa16.84■□□□□ 0.29
ABCF3-213ENST00000480539 GPRC5CQ9NQ84 441 aa16.84■□□□□ 0.29
ABCF3-213ENST00000480539 COL4A3BPQ9Y5P4 624 aa16.84■□□□□ 0.29
ABCF3-213ENST00000480539 LOXHD1Q8IVV2 1947 aa16.84■□□□□ 0.29
ABCF3-213ENST00000480539 RANBP2P49792 3224 aaKnown RBP16.83■□□□□ 0.29
ABCF3-213ENST00000480539 CUTAO60888 179 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 ACTN1P12814 892 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 TXLNAP40222 546 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 PAK2Q13177 524 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 PLEKHG4Q58EX7 1191 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 FAM102BQ5T8I3 360 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 TET1Q8NFU7 2136 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 ASAP3Q8TDY4 903 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 LEO1Q8WVC0 666 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-213ENST00000480539 TCP11Q8WWU5 503 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 PRPF31Q8WWY3 499 aaKnown RBP16.83■□□□□ 0.28
ABCF3-213ENST00000480539 HERVK_113Q902F9 699 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 SEPT8Q92599 483 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 SPATA32Q96LK8 384 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 RUSC1Q9BVN2 902 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 CCSER1Q9C0I3 900 aa16.83■□□□□ 0.28
ABCF3-213ENST00000480539 AGO3Q9H9G7 860 aaKnown RBP16.83■□□□□ 0.28
ABCF3-213ENST00000480539 CXXC1Q9P0U4 656 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-213ENST00000480539 A0A087WZ62 844 aa16.82■□□□□ 0.28
ABCF3-213ENST00000480539 SLC26A4O43511 780 aa16.82■□□□□ 0.28
ABCF3-213ENST00000480539 PLA2G4BP0C869 781 aa16.82■□□□□ 0.28
ABCF3-213ENST00000480539 CRYBB1P53674 252 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-213ENST00000480539 LAMTOR4Q0VGL1 99 aa16.82■□□□□ 0.28
ABCF3-213ENST00000480539 MCPH1Q8NEM0 835 aa16.82■□□□□ 0.28
ABCF3-213ENST00000480539 FDXACB1Q9BRP7 624 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-213ENST00000480539 MTIF3Q9H2K0 278 aaKnown RBP16.82■□□□□ 0.28
ABCF3-213ENST00000480539 GDPD2Q9HCC8 539 aa16.82■□□□□ 0.28
ABCF3-213ENST00000480539 CIZ1Q9ULV3 898 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-213ENST00000480539 PCDHA7Q9UN72 937 aa16.82■□□□□ 0.28
ABCF3-213ENST00000480539 NOC2LQ9Y3T9 749 aaKnown RBP16.82■□□□□ 0.28
ABCF3-213ENST00000480539 A0A087X0B3 334 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 A0A1W2PPC1 479 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 CSDE1O75534 798 aaKnown RBP16.81■□□□□ 0.28
ABCF3-213ENST00000480539 RPS6KA5O75582 802 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 BAIAP3O94812 1187 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 FGFR4P22455 802 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 RAD51AP2Q09MP3 1159 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 CAPSQ13938 189 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 DHX8Q14562 1220 aaKnown RBP16.81■□□□□ 0.28
ABCF3-213ENST00000480539 AXDND1Q5T1B0 1012 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-213ENST00000480539 SHC4Q6S5L8 630 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 ZNF410Q86VK4 478 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 FAM228AQ86W67 206 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 APBB2Q92870 758 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 POLD4Q9HCU8 107 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 BLOC1S4Q9NUP1 217 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 RCOR1Q9UKL0 485 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 PADI3Q9ULW8 664 aa16.81■□□□□ 0.28
ABCF3-213ENST00000480539 SRGAP2CP0DJJ0 459 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 DARSP14868 501 aaKnown RBP16.8■□□□□ 0.28
ABCF3-213ENST00000480539 CYP11B2P19099 503 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 KCNJ6P48051 423 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 SLC12A3P55017 1021 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 WDR5P61964 334 aaKnown RBP16.8■□□□□ 0.28
ABCF3-213ENST00000480539 DEFB103AP81534 67 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 MCM6Q14566 821 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 RASIP1Q5U651 963 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 FAM109BQ6ICB4 259 aaPredicted RBP16.8■□□□□ 0.28
ABCF3-213ENST00000480539 GPBP1Q86WP2 473 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 PDILTQ8N807 584 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 RNF149Q8NC42 400 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 LARP4BQ92615 738 aaKnown RBP16.8■□□□□ 0.28
ABCF3-213ENST00000480539 RAD54LQ92698 747 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 PANK2Q9BZ23 570 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 GCOM2Q9BZD3 368 aaPredicted RBP16.8■□□□□ 0.28
ABCF3-213ENST00000480539 CCDC39Q9UFE4 941 aa16.8■□□□□ 0.28
ABCF3-213ENST00000480539 MICAL3Q7RTP6 2002 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 PTPRSQ13332 1948 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 HIP1RO75146 1068 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 GLRA2P23416 452 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 EIF4BP23588 611 aaKnown RBP16.79■□□□□ 0.28
ABCF3-213ENST00000480539 ARL2P36404 184 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 STAT6P42226 847 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 CACNB1Q02641 598 aaPredicted RBP16.79■□□□□ 0.28
ABCF3-213ENST00000480539 NFX1Q12986 1120 aaKnown RBP16.79■□□□□ 0.28
ABCF3-213ENST00000480539 IKBKEQ14164 716 aa16.79■□□□□ 0.28
ABCF3-213ENST00000480539 HABP4Q5JVS0 413 aaKnown RBP16.79■□□□□ 0.28
ABCF3-213ENST00000480539 RRAGBQ5VZM2 374 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms