RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 A0A087WZ62 844 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.44□□□□□ -0.26
CCM2-212ENST00000480382 ARHGEF35A5YM69 484 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 GAS2O43903 313 aaKnown RBP13.44□□□□□ -0.26
CCM2-212ENST00000480382 EFCAB14O75071 495 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 RPS6KA5O75582 802 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 DGAT1O75907 488 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 PDIA4P13667 645 aaKnown RBP13.44□□□□□ -0.26
CCM2-212ENST00000480382 DNAJB2P25686 324 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 NFX1Q12986 1120 aaKnown RBP13.44□□□□□ -0.26
CCM2-212ENST00000480382 KSR1Q8IVT5 923 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 MYOCDQ8IZQ8 938 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 PSPC1Q8WXF1 523 aaKnown RBP13.44□□□□□ -0.26
CCM2-212ENST00000480382 LINC01599Q8WXQ3 324 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 NLRP4Q96MN2 994 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 FDXACB1Q9BRP7 624 aaPredicted RBP13.44□□□□□ -0.26
CCM2-212ENST00000480382 PBX4Q9BYU1 374 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 ERVK-5Q9HDB9 667 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 FBXO2Q9UK22 296 aaPredicted RBP13.44□□□□□ -0.26
CCM2-212ENST00000480382 COL4A3BPQ9Y5P4 624 aa13.44□□□□□ -0.26
CCM2-212ENST00000480382 CHD7Q9P2D1 2997 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 E9PMD0 336 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 AMHP03971 560 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 XRCC6P12956 609 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCM2-212ENST00000480382 DARSP14868 501 aaKnown RBP13.43□□□□□ -0.26
CCM2-212ENST00000480382 FGFR4P22455 802 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 LONP1P36776 959 aaKnown RBP13.43□□□□□ -0.26
CCM2-212ENST00000480382 NASPP49321 788 aaPredicted RBP13.43□□□□□ -0.26
CCM2-212ENST00000480382 FAM117BQ6P1L5 589 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 KCNK18Q7Z418 384 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 CABP7Q86V35 215 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 HERC6Q8IVU3 1022 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 ZNF710Q8N1W2 664 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 PHOSPHO2Q8TCD6 241 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 ASAP3Q8TDY4 903 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 TCP11Q8WWU5 503 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 PRPF31Q8WWY3 499 aaKnown RBP13.43□□□□□ -0.26
CCM2-212ENST00000480382 AK8Q96MA6 479 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 ZNF396Q96N95 335 aaPredicted RBP13.43□□□□□ -0.26
CCM2-212ENST00000480382 PNMA5Q96PV4 448 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 PLIN2Q99541 437 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 CSRNP2Q9H175 543 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 BHMT2Q9H2M3 363 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 TMX1Q9H3N1 280 aa13.43□□□□□ -0.26
CCM2-212ENST00000480382 DAXXQ9UER7 740 aaPredicted RBP13.43□□□□□ -0.26
CCM2-212ENST00000480382 YBX2Q9Y2T7 364 aaKnown RBP13.43□□□□□ -0.26
CCM2-212ENST00000480382 MYH11P35749 1972 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 MGEA5O60502 916 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 CSDE1O75534 798 aaKnown RBP13.42□□□□□ -0.26
CCM2-212ENST00000480382 BRD1O95696 1058 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 MYOGP15173 224 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 EIF4BP23588 611 aaKnown RBP13.42□□□□□ -0.26
CCM2-212ENST00000480382 LAMTOR4Q0VGL1 99 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 GRB10Q13322 594 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 SLC39A14Q15043 492 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 STK38Q15208 465 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 TMEM119Q4V9L6 283 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 SPECC1Q5M775 1068 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 HYIQ5T013 277 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 PADI6Q6TGC4 694 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 MAEAQ7L5Y9 396 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 ZNF410Q86VK4 478 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 CDK5RAP3Q96JB5 506 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 CLIC6Q96NY7 704 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 FTHL17Q9BXU8 183 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 GCOM2Q9BZD3 368 aaPredicted RBP13.42□□□□□ -0.26
CCM2-212ENST00000480382 POLR3FQ9H1D9 316 aaPredicted RBP13.42□□□□□ -0.26
CCM2-212ENST00000480382 GPRC5CQ9NQ84 441 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 TFIP11Q9UBB9 837 aaKnown RBP13.42□□□□□ -0.26
CCM2-212ENST00000480382 ST3GAL5Q9UNP4 418 aa13.42□□□□□ -0.26
CCM2-212ENST00000480382 SRPRBQ9Y5M8 271 aaKnown RBP13.42□□□□□ -0.26
CCM2-212ENST00000480382 COL4A4P53420 1690 aaPredicted RBP13.41□□□□□ -0.26
CCM2-212ENST00000480382 COL4A6Q14031 1691 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 TTC3P53804 2025 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 GPR182O15218 404 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 EYA4O95677 639 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 SRGAP2CP0DJJ0 459 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 UBA7P41226 1012 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 CDC42EP1Q00587 391 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 CAPSQ13938 189 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 KARSQ15046 597 aaKnown RBP13.41□□□□□ -0.26
CCM2-212ENST00000480382 RAB30Q15771 203 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 ODR4Q5SWX8 454 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 FAM102BQ5T8I3 360 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 Q7L0L9 218 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 RNF149Q8NC42 400 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 LINC00301Q8NCQ3 95 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 MCPH1Q8NEM0 835 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 TIFAQ96CG3 184 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 NT5C3AQ9H0P0 336 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 NKX2-4Q9H2Z4 354 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 MSRAQ9UJ68 235 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 DNM3Q9UQ16 869 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 ZDHHC9Q9Y397 364 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 PCDHA11Q9Y5I1 949 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 MORC2Q9Y6X9 1032 aaPredicted RBP13.41□□□□□ -0.26
CCM2-212ENST00000480382 NLRC5Q86WI3 1866 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 KIAA1671Q9BY89 1806 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 TCHHQ07283 1943 aa13.41□□□□□ -0.26
CCM2-212ENST00000480382 DENND3A2RUS2 1198 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms