RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TMEM266Q2M3C6 531 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 CTC1Q2NKJ3 1217 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 FAM160B1Q5W0V3 765 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 PDXDC2PQ6P474 469 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 B3GNT9Q6UX72 402 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 DTHD1Q6ZMT9 781 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 RPAINQ86UA6 219 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 CKAP2LQ8IYA6 745 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 SMAP1Q8IYB5 467 aaPredicted RBP10.15□□□□□ -0.78
VCP-206ENST00000480327 CRIPAKQ8N1N5 446 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 ZNF689Q96CS4 500 aaPredicted RBP10.15□□□□□ -0.78
VCP-206ENST00000480327 DYDC2Q96IM9 177 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 SAMD11Q96NU1 681 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 IFIH1Q9BYX4 1025 aaKnown RBP10.15□□□□□ -0.78
VCP-206ENST00000480327 SMARCAD1Q9H4L7 1026 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 ZNF215Q9UL58 517 aaPredicted RBP10.15□□□□□ -0.78
VCP-206ENST00000480327 CEP131Q9UPN4 1083 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 HCN4Q9Y3Q4 1203 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 USP34Q70CQ2 3546 aa10.15□□□□□ -0.78
VCP-206ENST00000480327 MYH9P35579 1960 aaKnown RBP10.15□□□□□ -0.78
VCP-206ENST00000480327 IGKV6D-21A0A0A0MT36 114 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 MBLAC1A4D2B0 266 aaPredicted RBP10.14□□□□□ -0.79
VCP-206ENST00000480327 PP2D1A8MPX8 630 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 PRR33A8MZF0 331 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 LAD1O00515 517 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 ENPP3O14638 875 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 CDC25AP30304 524 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 GRIN1Q05586 938 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 HYAL1Q12794 435 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 CTTNQ14247 550 aaKnown RBP10.14□□□□□ -0.79
VCP-206ENST00000480327 PLCB4Q15147 1175 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 STK38Q15208 465 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 PTPAQ15257 358 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 TIGD5Q53EQ6 642 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 RTN4RL1Q86UN2 441 aaPredicted RBP10.14□□□□□ -0.79
VCP-206ENST00000480327 TPH2Q8IWU9 490 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 APBB2Q92870 758 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 CLP1Q92989 425 aaKnown RBP10.14□□□□□ -0.79
VCP-206ENST00000480327 EIF2AK1Q9BQI3 630 aaKnown RBP10.14□□□□□ -0.79
VCP-206ENST00000480327 NSUN3Q9H649 340 aaKnown RBP10.14□□□□□ -0.79
VCP-206ENST00000480327 AGO3Q9H9G7 860 aaKnown RBP10.14□□□□□ -0.79
VCP-206ENST00000480327 ERAP1Q9NZ08 941 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 RGL1Q9NZL6 768 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 TRPC6Q9Y210 931 aa10.14□□□□□ -0.79
VCP-206ENST00000480327 ADGRA3Q8IWK6 1321 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 NRCAMQ92823 1304 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 A0A087WWV3 80 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 TMEM150BA6NC51 233 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 LINC01565O15544 149 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 ZNF862O60290 1169 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 TBX10O75333 385 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 BMP15O95972 392 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 ATP4AP20648 1035 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 DNAJB1P25685 340 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 SSTR3P32745 418 aaPredicted RBP10.13□□□□□ -0.79
VCP-206ENST00000480327 CTNNB1P35222 781 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 BMPR1AP36894 532 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 PRPHP41219 470 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 FXR2P51116 673 aaKnown RBP eCLIP10.13□□□□□ -0.791e-6■■■■□ 20.2
VCP-206ENST00000480327 IGBP1P78318 339 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 SLC39A14Q15043 492 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 EPHA7Q15375 998 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 ZRSR1Q15695 479 aaKnown RBP10.13□□□□□ -0.79
VCP-206ENST00000480327 PTPROQ16827 1216 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 TPRNQ4KMQ1 711 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 SPECC1Q5M775 1068 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 FBXO47Q5MNV8 452 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 PLPPR4Q7Z2D5 763 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 TRAPPC12Q8WVT3 735 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 DNAJB3Q8WWF6 145 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 SH2D3AQ9BRG2 576 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 CLDND1Q9NY35 253 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 WRAP73Q9P2S5 460 aaPredicted RBP10.13□□□□□ -0.79
VCP-206ENST00000480327 LRWD1Q9UFC0 647 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 MAFBQ9Y5Q3 323 aaPredicted RBP10.13□□□□□ -0.79
VCP-206ENST00000480327 TCHHQ07283 1943 aa10.13□□□□□ -0.79
VCP-206ENST00000480327 IGSF9BQ9UPX0 1349 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 DDX11L8A8MPP1 907 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 ZBTB39O15060 712 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 SPTLC2O15270 562 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 MED24O75448 989 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 DGKIO75912 1065 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 SLITRK3O94933 977 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 GNAT1P11488 350 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 INSRRP14616 1297 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 IRS1P35568 1242 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 CCT6AP40227 531 aaKnown RBP10.12□□□□□ -0.79
VCP-206ENST00000480327 QARSP47897 775 aaKnown RBP10.12□□□□□ -0.79
VCP-206ENST00000480327 NASPP49321 788 aaPredicted RBP10.12□□□□□ -0.79
VCP-206ENST00000480327 PSMC5P62195 406 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 PRKCEQ02156 737 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 PPFIA1Q13136 1202 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 CLUL1Q15846 466 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 GRIK4Q16099 956 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 PUS10Q3MIT2 529 aaKnown RBP10.12□□□□□ -0.79
VCP-206ENST00000480327 ARL6IP4Q66PJ3 421 aaKnown RBP10.12□□□□□ -0.79
VCP-206ENST00000480327 FIBCD1Q8N539 461 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 IGSF22Q8N9C0 903 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 LINC00301Q8NCQ3 95 aa10.12□□□□□ -0.79
VCP-206ENST00000480327 RDM1Q8NG50 284 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms