RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 PHF24Q9UPV7 400 aa18.64■□□□□ 0.57
SCAMP3-207ENST00000480219 PPP1R3GB7ZBB8 358 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 DNM1LO00429 736 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 PPP1R37O75864 691 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 NCKAP1LP55160 1127 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 PTPN11Q06124 597 aaPredicted RBP18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 BMT2Q1RMZ1 405 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 NFRKBQ6P4R8 1299 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 FOXR2Q6PJQ5 311 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 MTHFD1LQ6UB35 978 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 SFR1Q86XK3 245 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 ADSSL1Q8N142 457 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 GUF1Q8N442 669 aaKnown RBP18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 SLC43A3Q8NBI5 491 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 SLC17A8Q8NDX2 589 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 LMBR1Q8WVP7 490 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 SEZ6LQ9BYH1 1024 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 TSPY26PQ9H489 355 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 GPRC5CQ9NQ84 441 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 GRIN2DO15399 1336 aa18.63■□□□□ 0.57
SCAMP3-207ENST00000480219 GJB1P08034 283 aa18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 KLRC1P26715 233 aa18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 POU5F1BQ06416 359 aa18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 HIC1Q14526 733 aa18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 FAM102BQ5T8I3 360 aa18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 RETREG2Q8NC44 543 aa18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 TRAPPC12Q8WVT3 735 aa18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 RNF208Q9H0X6 261 aa18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 POLR3FQ9H1D9 316 aaPredicted RBP18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 GTF2IRD1Q9UHL9 959 aa18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 DACH1Q9UI36 760 aa18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 GDAQ9Y2T3 454 aa18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 UBE4BO95155 1302 aa18.62■□□□□ 0.57
SCAMP3-207ENST00000480219 SMIM35A0A1B0GVV1 85 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 EIF3DO15371 548 aaKnown RBP eCLIP18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 ASAP2O43150 1006 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 GNAT1P11488 350 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 CD44P16070 742 aaKnown RBP18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 GLRA2P23416 452 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 ERCC5P28715 1186 aaPredicted RBP18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 ABCD1P33897 745 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 NAMPTP43490 491 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 ALCAMQ13740 583 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 MXD4Q14582 209 aaPredicted RBP18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 NBPF20Q3BBV1 942 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 ANO6Q4KMQ2 910 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 ODR4Q5SWX8 454 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 ISM2Q6H9L7 571 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 C11orf57Q6ZUT1 292 aaPredicted RBP18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 ZNF720Q7Z2F6 126 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 MYCT1Q8N699 235 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 ZNF507Q8TCN5 953 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 HPS3Q969F9 1004 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 DEFB118Q96PH6 123 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 SETD4Q9NVD3 440 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 HDAC6Q9UBN7 1215 aa18.61■□□□□ 0.57
SCAMP3-207ENST00000480219 SFI1A8K8P3 1242 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 SGPL1O95470 568 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 PRCPP42785 496 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 NPTX2P47972 431 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 SOX10P56693 466 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 DRP2Q13474 957 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 PPP2R5AQ15172 486 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 EFCAB12Q6NXP0 572 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 GAS2L3Q86XJ1 694 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 IFNLR1Q8IU57 520 aaPredicted RBP18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 FAM178BQ8IXR5 827 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 C7orf31Q8N865 590 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 ASAP3Q8TDY4 903 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 PSPC1Q8WXF1 523 aaKnown RBP18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 BSNDQ8WZ55 320 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 TMEM143Q96AN5 459 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 HVCN1Q96D96 273 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 DHTKD1Q96HY7 919 aaPredicted RBP18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 GLT1D1Q96MS3 346 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 NFKBIZQ9BYH8 718 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 FGFBP2Q9BYJ0 223 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 DNAJC25Q9H1X3 360 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 SLC39A2Q9NP94 309 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 ARHGAP28Q9P2N2 729 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 MYH11P35749 1972 aa18.6■□□□□ 0.57
SCAMP3-207ENST00000480219 A0A1W2PQ45 241 aaPredicted RBP18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 A0A1W2PQY0 241 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 C17orf102A2RUQ5 167 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 KBTBD13C9JR72 458 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 H0YCG3 227 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 TMOD1P28289 359 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 MNX1P50219 401 aaPredicted RBP18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 DNM2P50570 870 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 CASP5P51878 434 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 GTF2BQ00403 316 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 DMP1Q13316 513 aaPredicted RBP18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 CDCA2Q69YH5 1023 aaPredicted RBP18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 MAEAQ7L5Y9 396 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 RPAINQ86UA6 219 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 SMYD4Q8IYR2 804 aaPredicted RBP18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 ZNF710Q8N1W2 664 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 ANKLE1Q8NAG6 615 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 TMEM161BQ8NDZ6 487 aa18.59■□□□□ 0.57
SCAMP3-207ENST00000480219 GLIS3Q8NEA6 775 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms