RNA–Protein interactions for RNA: ENST00000480112.5

CDK5RAP2-212, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,826 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-212ENST00000480112 SHROOM2Q13796 1616 aa13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 MAP3K10Q02779 954 aa13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 YWHAHQ04917 246 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 CDKL3Q8IVW4 592 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SKA2Q8WVK7 121 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 FAM161BQ96MY7 647 aa13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 APOA1P02647 267 aa13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 FAM83BQ5T0W9 1011 aa13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 DAB2IPQ5VWQ8 1189 aa13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 ZNF473Q8WTR7 871 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 FAM20AQ96MK3 541 aa13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 PUS3Q9BZE2 481 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 WARS2Q9UGM6 360 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP2-212ENST00000480112 H0Y3Z8 333 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 AP3B1O00203 1094 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 ZNF564Q8TBZ8 553 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 BTBD6Q96KE9 485 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SLC13A4Q9UKG4 626 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 GDAQ9Y2T3 454 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 NEO1Q92859 1461 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SRGAP2O75044 1071 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 TRADDQ15628 312 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 NAALADL2Q58DX5 795 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 PAWRQ96IZ0 340 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SERPINB13Q9UIV8 391 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SNX12Q9UMY4 172 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SMAPO00193 183 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 ESRRBO95718 433 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 AARSP49588 968 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 TNFAIP2Q03169 654 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 FAM47EQ6ZV65 393 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SPATA4Q8NEY3 305 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SGSM3Q96HU1 749 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 DEAF1O75398 565 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 PDHA1P08559 390 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 PRCPP42785 496 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 AP3M2P53677 418 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 HP1BP3Q5SSJ5 553 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 RHOT1Q8IXI2 618 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 NDUFAF2Q8N183 169 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 LAMC1P11047 1609 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 WDR64B1ANS9 1081 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SYF2O95926 243 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 KRT16P08779 473 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 HIC1Q14526 733 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 FRMD5Q7Z6J6 570 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 XXYLT1Q8NBI6 393 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 MCPH1Q8NEM0 835 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 CMTM5Q96DZ9 223 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 EEF2KMTQ96G04 330 aa13.66□□□□□ -0.22
CDK5RAP2-212ENST00000480112 GFPT1Q06210 699 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 RSRC2Q7L4I2 434 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 HNRNPLLQ8WVV9 542 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 ROPN1BQ9BZX4 212 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 ROPN1Q9HAT0 212 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 PPME1Q9Y570 386 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SSU72P8A0A1W2PR75 194 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SLC16A3O15427 465 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 PMLP29590 882 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 ELF1P32519 619 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 MRPS35P82673 323 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 TFAMQ00059 246 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 PTPN21Q16825 1174 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 NFRKBQ6P4R8 1299 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 RASGRP2Q7LDG7 609 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 ELOA2Q8IYF1 753 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 RIBC1Q8N443 379 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 DCLK2Q8N568 766 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 NBPF3Q9H094 633 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 FBXL5Q9UKA1 691 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 SYNJ2BP-COX16A0A087WUM0 186 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 A0A087WWV3 80 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 ZBBXA8MT70 800 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 H3BRJ5 948 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 IL10P22301 178 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 CCNA1P78396 465 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 KLC1Q07866 573 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 ACTN3Q08043 901 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 TRIM59Q8IWR1 403 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 KIF9Q9HAQ2 790 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 COX16Q9P0S2 106 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 E2F6O75461 281 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 CIITAP33076 1130 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 CACNB1Q02641 598 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 KCNH2Q12809 1159 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 COASYQ13057 564 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 KNOP1Q1ED39 458 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 POTEAQ6S8J7 498 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 ZNF710Q8N1W2 664 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 CNKSR1Q969H4 720 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 PBXIP1Q96AQ6 731 aa13.65□□□□□ -0.22
CDK5RAP2-212ENST00000480112 XPAP23025 273 aaPredicted RBP13.65□□□□□ -0.23
CDK5RAP2-212ENST00000480112 LRRC8BQ6P9F7 803 aa13.65□□□□□ -0.23
CDK5RAP2-212ENST00000480112 SLC30A9Q6PML9 568 aa13.65□□□□□ -0.23
CDK5RAP2-212ENST00000480112 NUDCD3Q8IVD9 361 aa13.65□□□□□ -0.23
CDK5RAP2-212ENST00000480112 TTC8Q8TAM2 541 aa13.65□□□□□ -0.23
CDK5RAP2-212ENST00000480112 STRBPQ96SI9 672 aaKnown RBP13.65□□□□□ -0.23
CDK5RAP2-212ENST00000480112 MSTO1Q9BUK6 570 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms