RNA–Protein interactions for RNA: ENST00000479635.1

VSIG1-204, Transcript of V-set and immunoglobulin domain containing 1, human

TSL 3

Gene VSIG1, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VSIG1-204	ENST00000479635	LAG3	P18627	525 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	ATF4	P18848	351 aa	Predicted RBP	4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	AMY2B	P19961	511 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	TAP1	Q03518	808 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	MAP3K12	Q12852	859 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	FXN	Q16595	210 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	HTR3D	Q70Z44	454 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	LRP10	Q7Z4F1	713 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	NELL1	Q92832	810 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	C16orf92	Q96LL3	132 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	SPATA5L1	Q9BVQ7	753 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	EPN3	Q9H201	632 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	CCSER2	Q9H7U1	834 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	IL23A	Q9NPF7	189 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	MAGEL2	Q9UJ55	1249 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	FRMD4B	Q9Y2L6	1034 aa		4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	CCDC9	Q9Y3X0	531 aa	Known RBP	4.1	□□□□□ -1.75
VSIG1-204	ENST00000479635	CENPVL1	A0A0U1RR11	272 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	PRAMEF22	A3QJZ6	481 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	C2orf78	A6NCI8	922 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	LPXN	O60711	386 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	RECQL4	O94761	1208 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	IPO13	O94829	963 aa	Known RBP	4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	PYGM	P11217	842 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	ERCC5	P28715	1186 aa	Predicted RBP	4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	ZEB1	P37275	1124 aa	Predicted RBP	4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	JAM2	P57087	298 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	SESN2	P58004	480 aa	Predicted RBP	4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	TCIRG1	Q13488	830 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	TNNI3K	Q59H18	835 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	MFSD5	Q6N075	450 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	CXorf67	Q86X51	503 aa	Predicted RBP	4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	BCL6B	Q8N143	479 aa	Predicted RBP	4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	LCORL	Q8N3X6	602 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	BOLL	Q8N9W6	283 aa	Known RBP	4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	HIPK4	Q8NE63	616 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	SCARB1	Q8WTV0	552 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	SMG7	Q92540	1137 aa	Known RBP	4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	ARL8A	Q96BM9	186 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	BRIP1	Q9BX63	1249 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	ANKFY1	Q9P2R3	1169 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	SFMBT1	Q9UHJ3	866 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	ASXL2	Q76L83	1435 aa		4.09	□□□□□ -1.75
VSIG1-204	ENST00000479635	COL11A2	P13942	1736 aa	Predicted RBP	4.09	□□□□□ -1.76
VSIG1-204	ENST00000479635	GJB6	O95452	261 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	C1R	P00736	705 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	HK1	P19367	917 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	ZFP36	P26651	326 aa	Known RBP	4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	APEX1	P27695	318 aa	Known RBP	4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	KRTAP10-6	P60371	365 aa	Predicted RBP	4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	ADAM8	P78325	824 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	PAK1	Q13153	545 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	ERCC6L	Q2NKX8	1250 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	KRT40	Q6A162	431 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	CMTR2	Q8IYT2	770 aa	Known RBP	4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	MDGA1	Q8NFP4	955 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	GFM2	Q969S9	779 aa	Known RBP	4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	FBXW5	Q969U6	566 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	ZNF512	Q96ME7	567 aa	Predicted RBP	4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	AARSD1	Q9BTE6	412 aa	Known RBP	4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	WDR11	Q9BZH6	1224 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	SERHL2	Q9H4I8	314 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	ZNF768	Q9H5H4	540 aa	Known RBP	4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	NCDN	Q9UBB6	729 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	TRAF6	Q9Y4K3	522 aa		4.08	□□□□□ -1.76
VSIG1-204	ENST00000479635	POLR2A	P24928	1970 aa	Known RBP	4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	ZNF185	O15231	689 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	CLASP2	O75122	1294 aa	Known RBP	4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	PABPC1	P11940	636 aa	Known RBP	4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	GYPE	P15421	78 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	TCF3	P15923	654 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	IFRD2	Q12894	506 aa	Predicted RBP	4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	SEC23A	Q15436	765 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	NSMF	Q6X4W1	530 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	MTDH	Q86UE4	582 aa	Known RBP	4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	CALML6	Q8TD86	181 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	ASB15	Q8WXK1	588 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	CAVIN3	Q969G5	261 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	OSBP2	Q969R2	916 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	GBP4	Q96PP9	640 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	SLC29A3	Q9BZD2	475 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	CAPN10	Q9HC96	672 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	SAE1	Q9UBE0	346 aa	Predicted RBP	4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	DENND2A	Q9ULE3	1009 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	CBLC	Q9ULV8	474 aa		4.07	□□□□□ -1.76
VSIG1-204	ENST00000479635	GNAT2	P19087	354 aa		4.06	□□□□□ -1.76
VSIG1-204	ENST00000479635	CXCR5	P32302	372 aa		4.06	□□□□□ -1.76
VSIG1-204	ENST00000479635	ETFB	P38117	255 aa		4.06	□□□□□ -1.76
VSIG1-204	ENST00000479635	AVPR1B	P47901	424 aa		4.06	□□□□□ -1.76
VSIG1-204	ENST00000479635	ELL	P55199	621 aa	Predicted RBP	4.06	□□□□□ -1.76
VSIG1-204	ENST00000479635	CRY1	Q16526	586 aa		4.06	□□□□□ -1.76
VSIG1-204	ENST00000479635	GPR162	Q16538	588 aa		4.06	□□□□□ -1.76
VSIG1-204	ENST00000479635	PRR16	Q569H4	304 aa		4.06	□□□□□ -1.76
VSIG1-204	ENST00000479635	VPS37D	Q86XT2	251 aa		4.06	□□□□□ -1.76
VSIG1-204	ENST00000479635	ZNF366	Q8N895	744 aa		4.06	□□□□□ -1.76
VSIG1-204	ENST00000479635	ST8SIA2	Q92186	375 aa		4.06	□□□□□ -1.76
VSIG1-204	ENST00000479635	EIF2B4	Q9UI10	523 aa	Known RBP	4.06	□□□□□ -1.76
VSIG1-204	ENST00000479635	SCD	O00767	359 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms