RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 MMP10P09238 476 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 ATP8B4Q8TF62 1192 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 CALR3Q96L12 384 aaKnown RBP14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 SPAG5Q96R06 1193 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 PSMD1Q99460 953 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 DHX36Q9H2U1 1008 aaKnown RBP14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 RGL1Q9NZL6 768 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 SUGT1Q9Y2Z0 365 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 A0A1W2PRG0 241 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 BTNL10A8MVZ5 291 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 MARSP56192 900 aaKnown RBP14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 IKQ13123 557 aaPredicted RBP14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 XRCC4Q13426 336 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 LACTB2Q53H82 288 aaPredicted RBP14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 C3orf20Q8ND61 904 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 CRYGNQ8WXF5 182 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 EPB41L4BQ9H329 900 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 TDRD3Q9H7E2 651 aaKnown RBP14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 OSGEPQ9NPF4 335 aa14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 BMP2KQ9NSY1 1161 aaPredicted RBP14.46□□□□□ -0.09
PDZRN3-208ENST00000479530 LTBP1Q14766 1721 aa14.46□□□□□ -0.1
PDZRN3-208ENST00000479530 EML1O00423 815 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 CTNND1O60716 968 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 NDUFB10O96000 172 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 NPR1P16066 1061 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 NR2F2P24468 414 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 ICA1Q05084 483 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 GIT2Q14161 759 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 ACCSLQ4AC99 568 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 KIAA1755Q5JYT7 1200 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 SLC27A3Q5K4L6 730 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 DAAM2Q86T65 1068 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 RPAINQ86UA6 219 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 CCDC65Q8IXS2 484 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 TBC1D31Q96DN5 1066 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 ZDHHC15Q96MV8 337 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 HDAC9Q9UKV0 1011 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 STXBP5LQ9Y2K9 1186 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 PPP1R12BO60237 982 aaPredicted RBP14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 FGGP02679 453 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 RPSAP08865 295 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 GCFC2P16383 781 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 PON1P27169 355 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 POU5F1Q01860 360 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 IFFO1Q0D2I5 559 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 ERMARDQ5T6L9 678 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 NT5DC3Q86UY8 548 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 SFR1Q86XK3 245 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 MIEF2Q96C03 454 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 XPO6Q96QU8 1125 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 REEP2Q9BRK0 252 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 SPATA31A6Q5VVP1 1343 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 SMIM23A6NLE4 172 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 CASP4P49662 377 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 UBXN2AP68543 259 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 ELF3P78545 371 aaPredicted RBP14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 DCAF12L1Q5VU92 463 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 HIBCHQ6NVY1 386 aaPredicted RBP14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 FOXR2Q6PJQ5 311 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 RASGEF1CQ8N431 466 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 SEC14L1Q92503 715 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 GLG1Q92896 1179 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 MKL1Q969V6 931 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 TLCD1Q96CP7 247 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 CHMP6Q96FZ7 201 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 NT5C3AQ9H0P0 336 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 VEZTQ9HBM0 779 aa14.45□□□□□ -0.1
PDZRN3-208ENST00000479530 CYP3A7-CYP3A51PA0A087WV96 503 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 DDX3XO00571 662 aaKnown RBP eCLIP14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 PPIP5K2O43314 1243 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 MGRN1O60291 552 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 GH2P01242 217 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 CHN1P15882 459 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 CYP3A7P24462 503 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 HSPA1LP34931 641 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 MTMR3Q13615 1198 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 DACT2Q5SW24 774 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 SLFN11Q7Z7L1 901 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 KSR1Q8IVT5 923 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 PIGOQ8TEQ8 1089 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 CCDC17Q96LX7 622 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 ZNF317Q96PQ6 595 aaPredicted RBP14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 RUSC1Q9BVN2 902 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 ADAM7Q9H2U9 754 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 ERVK-5Q9HDB9 667 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 PI4KBQ9UBF8 816 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 TRPC5Q9UL62 973 aaPredicted RBP14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 CLIC2O15247 247 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 MSH4O15457 936 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 GNA14O95837 355 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 ECE1P42892 770 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 DCAF17Q5H9S7 520 aaPredicted RBP14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 MBOAT7Q96N66 472 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 TXLNGYQ9BZA5 131 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 LRRC27Q9C0I9 530 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 NYAP2Q9P242 653 aa14.44□□□□□ -0.1
PDZRN3-208ENST00000479530 SMCHD1A6NHR9 2005 aa14.43□□□□□ -0.1
PDZRN3-208ENST00000479530 TLDC2A0PJX2 215 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms