RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 KIAA0319LQ8IZA0 1049 aa7.55□□□□□ -1.2
VCP-205ENST00000479300 CMTR1Q8N1G2 835 aaKnown RBP7.55□□□□□ -1.2
VCP-205ENST00000479300 MICAL1Q8TDZ2 1067 aa7.55□□□□□ -1.2
VCP-205ENST00000479300 CCDC12Q8WUD4 166 aaPredicted RBP7.55□□□□□ -1.2
VCP-205ENST00000479300 GLG1Q92896 1179 aa7.55□□□□□ -1.2
VCP-205ENST00000479300 CDCA3Q99618 268 aaPredicted RBP7.55□□□□□ -1.2
VCP-205ENST00000479300 ADAM2Q99965 735 aa7.55□□□□□ -1.2
VCP-205ENST00000479300 SDF4Q9BRK5 362 aa7.55□□□□□ -1.2
VCP-205ENST00000479300 SMARCAD1Q9H4L7 1026 aa7.55□□□□□ -1.2
VCP-205ENST00000479300 TMEM260Q9NX78 707 aa7.55□□□□□ -1.2
VCP-205ENST00000479300 TCEAL9Q9UHQ7 104 aa7.55□□□□□ -1.2
VCP-205ENST00000479300 PCDHA6Q9UN73 950 aa7.55□□□□□ -1.2
VCP-205ENST00000479300 PCDHA8Q9Y5H6 950 aa7.55□□□□□ -1.2
VCP-205ENST00000479300 KMT2BQ9UMN6 2715 aaPredicted RBP7.55□□□□□ -1.2
VCP-205ENST00000479300 DENND4AQ7Z401 1863 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 SMIM35A0A1B0GVV1 85 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 hCG_1642624A0A1W2PR95 340 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 PI15O43692 258 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 CCNE2O96020 404 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 XRCC6P12956 609 aaKnown RBP eCLIP7.54□□□□□ -1.2
VCP-205ENST00000479300 NPR3P17342 541 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 METAP2P50579 478 aaKnown RBP eCLIP7.54□□□□□ -1.2
VCP-205ENST00000479300 FAM189BP81408 668 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 KRT76Q01546 638 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 PLCB3Q01970 1234 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 NFX1Q12986 1120 aaKnown RBP7.54□□□□□ -1.2
VCP-205ENST00000479300 MTMR1Q13613 665 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 TSGA10IPQ3SY00 556 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 ASTLQ6HA08 431 aaPredicted RBP7.54□□□□□ -1.2
VCP-205ENST00000479300 MTHFD1LQ6UB35 978 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 FAM228AQ86W67 206 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 THNSL1Q8IYQ7 743 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 C12orf76Q8N812 135 aaPredicted RBP7.54□□□□□ -1.2
VCP-205ENST00000479300 MRPS27Q92552 414 aaKnown RBP7.54□□□□□ -1.2
VCP-205ENST00000479300 JAKMIP1Q96N16 626 aaKnown RBP7.54□□□□□ -1.2
VCP-205ENST00000479300 CASD1Q96PB1 797 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 TCF25Q9BQ70 676 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 IRF2BPLQ9H1B7 796 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 AZI2Q9H6S1 392 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 C6orf50Q9HD87 102 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 JADE2Q9NQC1 790 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 AAASQ9NRG9 546 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 RGS18Q9NS28 235 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 LRFN2Q9ULH4 789 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 ST3GAL5Q9UNP4 418 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 SORCS3Q9UPU3 1222 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 LZTS1Q9Y250 596 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 PCDHB7Q9Y5E2 793 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 PCDHB12Q9Y5F1 795 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 HCFC2Q9Y5Z7 792 aa7.54□□□□□ -1.2
VCP-205ENST00000479300 V9GY48 417 aaPredicted RBP7.54□□□□□ -1.2
VCP-205ENST00000479300 CEP250Q9BV73 2442 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 IGKV6D-21A0A0A0MT36 114 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 MED19A0JLT2 244 aaPredicted RBP7.53□□□□□ -1.2
VCP-205ENST00000479300 SMCO2A6NFE2 343 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 C2orf71A6NGG8 1288 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 ESPNB1AK53 854 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 RPLP2P05387 115 aaKnown RBP7.53□□□□□ -1.2
VCP-205ENST00000479300 ATP4AP20648 1035 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 KLRC1P26715 233 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 RCAN1P53805 252 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 ACTR2P61160 394 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 EXOSC10Q01780 885 aaKnown RBP7.53□□□□□ -1.2
VCP-205ENST00000479300 MTMR3Q13615 1198 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 E2F4Q16254 413 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 SPOUT1Q5T280 376 aaKnown RBP7.53□□□□□ -1.2
VCP-205ENST00000479300 PDE12Q6L8Q7 609 aaKnown RBP7.53□□□□□ -1.2
VCP-205ENST00000479300 TYW1BQ6NUM6 668 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 Q6ZUG5 572 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 SLC24A5Q71RS6 500 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 PLPPR4Q7Z2D5 763 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 ERMP1Q7Z2K6 904 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 MTERF4Q7Z6M4 381 aaKnown RBP7.53□□□□□ -1.2
VCP-205ENST00000479300 ZBTB33Q86T24 672 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 SMAP1Q8IYB5 467 aaPredicted RBP7.53□□□□□ -1.2
VCP-205ENST00000479300 UBALD2Q8IYN6 164 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 ADSSL1Q8N142 457 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 TCEANC2Q96MN5 208 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 PPP1R16BQ96T49 567 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 ADAM7Q9H2U9 754 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 JPH1Q9HDC5 661 aaPredicted RBP7.53□□□□□ -1.2
VCP-205ENST00000479300 RIC8AQ9NPQ8 531 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 KCNH7Q9NS40 1196 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 SLC9A2Q9UBY0 812 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 GINS2Q9Y248 185 aa7.53□□□□□ -1.2
VCP-205ENST00000479300 EVPLQ92817 2033 aa7.52□□□□□ -1.2
VCP-205ENST00000479300 DENND3A2RUS2 1198 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 M0QZ92 97 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 CLASP2O75122 1294 aaKnown RBP7.52□□□□□ -1.21
VCP-205ENST00000479300 GPR32O75388 356 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 RPS6KA5O75582 802 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 ATG7O95352 703 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 C22orf31O95567 290 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 HOXB8P17481 243 aaPredicted RBP7.52□□□□□ -1.21
VCP-205ENST00000479300 LAG3P18627 525 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 NCLP19338 710 aaKnown RBP7.52□□□□□ -1.21
VCP-205ENST00000479300 GNA11P29992 359 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 ID4P47928 161 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 STAT5BP51692 787 aa7.52□□□□□ -1.21
VCP-205ENST00000479300 AP3B2Q13367 1082 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms