RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 NRCAMQ92823 1304 aa14.52□□□□□ -0.08
CHD3-210ENST00000479080 TREHO43280 583 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 SMC2O95347 1197 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 COL6A1P12109 1028 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 GJA8P48165 433 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 NLRP12P59046 1061 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 TBC1D8BQ0IIM8 1120 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 EPM2AIP1Q7L775 607 aaPredicted RBP14.52□□□□□ -0.09
CHD3-210ENST00000479080 GAS2L3Q86XJ1 694 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 ARRDC4Q8NCT1 418 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 MCPH1Q8NEM0 835 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 CCDC43Q96MW1 224 aaKnown RBP14.52□□□□□ -0.09
CHD3-210ENST00000479080 KIFC3Q9BVG8 833 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 TIPINQ9BVW5 301 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 STRA6Q9BX79 667 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 LRRC27Q9C0I9 530 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 TBC1D7Q9P0N9 293 aa14.52□□□□□ -0.09
CHD3-210ENST00000479080 PPP1R3GB7ZBB8 358 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 PPP1R37O75864 691 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 FAM13AO94988 1023 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 EDN1P05305 212 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 KRT18P05783 430 aaKnown RBP14.51□□□□□ -0.09
CHD3-210ENST00000479080 MYBP10242 640 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 PLS3P13797 630 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 NMT1P30419 496 aaKnown RBP14.51□□□□□ -0.09
CHD3-210ENST00000479080 HOXD13P35453 343 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 ITGA7Q13683 1181 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 CAPSQ13938 189 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 FAM26FQ5R3K3 315 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 TAS1R3Q7RTX0 852 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 KSR1Q8IVT5 923 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 KIAA0319LQ8IZA0 1049 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 SLC7A3Q8WY07 619 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 DHX38Q92620 1227 aaKnown RBP14.51□□□□□ -0.09
CHD3-210ENST00000479080 IKZF4Q9H2S9 585 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 SLC39A2Q9NP94 309 aa14.51□□□□□ -0.09
CHD3-210ENST00000479080 HOOK1Q9UJC3 728 aaKnown RBP14.51□□□□□ -0.09
CHD3-210ENST00000479080 C17orf102A2RUQ5 167 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 RRN3P2A6NIE6 340 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 KBTBD13C9JR72 458 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 TBCAO75347 108 aaKnown RBP14.5□□□□□ -0.09
CHD3-210ENST00000479080 CABYRO75952 493 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 GAP43P17677 238 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 NPTX2P47972 431 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 CDK7P50613 346 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 NCKAP1LP55160 1127 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 RTP1P59025 263 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 TRIM71Q2Q1W2 868 aaKnown RBP14.5□□□□□ -0.09
CHD3-210ENST00000479080 HERC4Q5GLZ8 1057 aaPredicted RBP14.5□□□□□ -0.09
CHD3-210ENST00000479080 ZNF658Q5TYW1 1059 aaPredicted RBP14.5□□□□□ -0.09
CHD3-210ENST00000479080 EFCAB12Q6NXP0 572 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 NFRKBQ6P4R8 1299 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 LRSAM1Q6UWE0 723 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 CCDC65Q8IXS2 484 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 C7orf31Q8N865 590 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 TRIML1Q8N9V2 468 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 PRPF31Q8WWY3 499 aaKnown RBP14.5□□□□□ -0.09
CHD3-210ENST00000479080 KIFAP3Q92845 792 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 ZNF668Q96K58 619 aaPredicted RBP14.5□□□□□ -0.09
CHD3-210ENST00000479080 SUGCTQ9HAC7 445 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 PARVGQ9HBI0 331 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 OLFML3Q9NRN5 406 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 EXOC1Q9NV70 894 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 COL4A3BPQ9Y5P4 624 aa14.5□□□□□ -0.09
CHD3-210ENST00000479080 ZMYM2Q9UBW7 1377 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 SLC16A4O15374 487 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 MAGEB2O15479 319 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 LETM1O95202 739 aaPredicted RBP14.49□□□□□ -0.09
CHD3-210ENST00000479080 VTNP04004 478 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 PRCPP42785 496 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 PEX3P56589 373 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 KCNA1Q09470 495 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 ZC2HC1CQ53FD0 456 aaPredicted RBP14.49□□□□□ -0.09
CHD3-210ENST00000479080 COBLL1Q53SF7 1204 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 IER5Q5VY09 327 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 ADSSL1Q8N142 457 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 MYCT1Q8N699 235 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 TMEM161BQ8NDZ6 487 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 SCFD1Q8WVM8 642 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 CCDC34Q96HJ3 373 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 DRC1Q96MC2 740 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 DNAJC25Q9H1X3 360 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 ZHX3Q9H4I2 956 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 STARD7Q9NQZ5 370 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 TRMT13Q9NUP7 481 aaKnown RBP14.49□□□□□ -0.09
CHD3-210ENST00000479080 ARHGAP28Q9P2N2 729 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 SUCLA2Q9P2R7 463 aaPredicted RBP14.49□□□□□ -0.09
CHD3-210ENST00000479080 SIP14410 1827 aa14.49□□□□□ -0.09
CHD3-210ENST00000479080 A0A0U1RQG5 324 aaPredicted RBP14.48□□□□□ -0.09
CHD3-210ENST00000479080 SMIM35A0A1B0GVV1 85 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 ARVCFO00192 962 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 GAS2O43903 313 aaKnown RBP14.48□□□□□ -0.09
CHD3-210ENST00000479080 CYP2C9P11712 490 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 PMS1P54277 932 aaKnown RBP14.48□□□□□ -0.09
CHD3-210ENST00000479080 LAMTOR4Q0VGL1 99 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 STX1AQ16623 288 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 ANO6Q4KMQ2 910 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 FAM47CQ5HY64 1035 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 ODR4Q5SWX8 454 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 CDCA2Q69YH5 1023 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms