RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 PCDH18Q9HCL0 1135 aa6.96□□□□□ -1.3
CCDC171-207ENST00000478913 CNOT6Q9ULM6 557 aaKnown RBP6.96□□□□□ -1.3
CCDC171-207ENST00000478913 B3GALT1Q9Y5Z6 326 aa6.96□□□□□ -1.3
CCDC171-207ENST00000478913 MEGF6O75095 1541 aa6.96□□□□□ -1.3
CCDC171-207ENST00000478913 UBR1Q8IWV7 1749 aa6.96□□□□□ -1.3
CCDC171-207ENST00000478913 PLSCR1O15162 318 aa6.95□□□□□ -1.3
CCDC171-207ENST00000478913 ZBTB48P10074 688 aaPredicted RBP6.95□□□□□ -1.3
CCDC171-207ENST00000478913 ATP2A2P16615 1042 aaKnown RBP6.95□□□□□ -1.3
CCDC171-207ENST00000478913 IL2P60568 153 aa6.95□□□□□ -1.3
CCDC171-207ENST00000478913 TMEM132BQ14DG7 1078 aa6.95□□□□□ -1.3
CCDC171-207ENST00000478913 SPOCD1Q6ZMY3 1216 aa6.95□□□□□ -1.3
CCDC171-207ENST00000478913 DLG3Q92796 817 aa6.95□□□□□ -1.3
CCDC171-207ENST00000478913 USP7Q93009 1102 aa6.95□□□□□ -1.3
CCDC171-207ENST00000478913 THG1LQ9NWX6 298 aaKnown RBP6.95□□□□□ -1.3
CCDC171-207ENST00000478913 HSPBP1Q9NZL4 362 aa6.95□□□□□ -1.3
CCDC171-207ENST00000478913 SMG5Q9UPR3 1016 aaKnown RBP6.95□□□□□ -1.3
CCDC171-207ENST00000478913 PLXNC1O60486 1568 aa6.95□□□□□ -1.3
CCDC171-207ENST00000478913 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.94□□□□□ -1.3
CCDC171-207ENST00000478913 RFXAPO00287 272 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 C4BPAP04003 597 aaKnown RBP6.94□□□□□ -1.3
CCDC171-207ENST00000478913 KRT1P04264 644 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 PI3P19957 117 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 KIF11P52732 1056 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 STRN3Q13033 797 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 SSPNQ14714 243 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 DHCR24Q15392 516 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 SEC23AQ15436 765 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 CD276Q5ZPR3 534 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 VASNQ6EMK4 673 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 TMC5Q6UXY8 1006 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 KIAA1958Q8N8K9 716 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 CHTF18Q8WVB6 975 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 CD320Q9NPF0 282 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 OXSMQ9NWU1 459 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 PMF1-BGLAPU3KQ54 211 aa6.94□□□□□ -1.3
CCDC171-207ENST00000478913 SZT2Q5T011 3432 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 CPEP16870 476 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 RAP1GAPP47736 663 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 KPNA1P52294 538 aaPredicted RBP6.93□□□□□ -1.3
CCDC171-207ENST00000478913 HERVK_113P62684 666 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 OCRLQ01968 901 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 DBPQ10586 325 aaPredicted RBP6.93□□□□□ -1.3
CCDC171-207ENST00000478913 FBLN7Q53RD9 439 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 CC2D1AQ6P1N0 951 aaPredicted RBP6.93□□□□□ -1.3
CCDC171-207ENST00000478913 CNKSR3Q6P9H4 555 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 FAM129CQ86XR2 697 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 TMEFF1Q8IYR6 380 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 GPR101Q96P66 508 aaPredicted RBP6.93□□□□□ -1.3
CCDC171-207ENST00000478913 TMEM209Q96SK2 561 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 SYT3Q9BQG1 590 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 GORASP1Q9BQQ3 440 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 ACSS2Q9NR19 701 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 ARHGAP28Q9P2N2 729 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 RBPJLQ9UBG7 517 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 KCTD3Q9Y597 815 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 MYO5CQ9NQX4 1742 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 PRAG1Q86YV5 1406 aa6.93□□□□□ -1.3
CCDC171-207ENST00000478913 FOXP2O15409 715 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 SLC9A1P19634 815 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 SDHAP31040 664 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 ADCYAP1R1P41586 468 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 ITGA1P56199 1179 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 NFKB2Q00653 900 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 KCNA10Q16322 511 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 CREB3L3Q68CJ9 461 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 PTF1AQ7RTS3 328 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 STK32CQ86UX6 486 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 C11orf74Q86VG3 221 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 PROSER1Q86XN7 944 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 AFAP1L2Q8N4X5 818 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 EFHBQ8N7U6 833 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 ZBTB8AQ96BR9 441 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 NOX5Q96PH1 765 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 TTC1Q99614 292 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 C11orf84Q9BUA3 381 aaPredicted RBP6.92□□□□□ -1.3
CCDC171-207ENST00000478913 H2AFY2Q9P0M6 372 aaPredicted RBP6.92□□□□□ -1.3
CCDC171-207ENST00000478913 SPATA31A5Q5VU36 1347 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 SPATA31A7Q8IWB4 1347 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 DCCP43146 1447 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 ERVK-7P63135 1459 aa6.92□□□□□ -1.3
CCDC171-207ENST00000478913 EHBP1L1Q8N3D4 1523 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 TULP4Q9NRJ4 1543 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 SAMD9Q5K651 1589 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 COL22A1Q8NFW1 1626 aaPredicted RBP6.91□□□□□ -1.3
CCDC171-207ENST00000478913 ARHGEF28Q8N1W1 1705 aaKnown RBP6.91□□□□□ -1.3
CCDC171-207ENST00000478913 NPIPB6E9PJ23 425 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 DVL2O14641 736 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 FKBP9O95302 570 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 PLA2G1BP04054 148 aaKnown RBP6.91□□□□□ -1.3
CCDC171-207ENST00000478913 MMEP08473 750 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 ENO2P09104 434 aaPredicted RBP6.91□□□□□ -1.3
CCDC171-207ENST00000478913 AOAHP28039 575 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 LSSP48449 732 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 LINC00310P59036 64 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 ZNF124Q15973 351 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 ZNF385BQ569K4 471 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 LIPIQ6XZB0 460 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 FKBP9P1Q75LS8 142 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 STRA8Q7Z7C7 330 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 PASD1Q8IV76 773 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms