RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 ATAT1Q5SQI0 421 aa16.45■□□□□ 0.22
USP11-207ENST00000478596 HEATR3Q7Z4Q2 680 aa16.45■□□□□ 0.22
USP11-207ENST00000478596 SPRYD3Q8NCJ5 442 aa16.45■□□□□ 0.22
USP11-207ENST00000478596 BORCS6Q96GS4 357 aa16.45■□□□□ 0.22
USP11-207ENST00000478596 PIGSQ96S52 555 aa16.45■□□□□ 0.22
USP11-207ENST00000478596 TYW1Q9NV66 732 aaKnown RBP16.45■□□□□ 0.22
USP11-207ENST00000478596 DBR1Q9UK59 544 aaKnown RBP16.45■□□□□ 0.22
USP11-207ENST00000478596 PCDHB7Q9Y5E2 793 aa16.45■□□□□ 0.22
USP11-207ENST00000478596 ANKRD11Q6UB99 2663 aaPredicted RBP16.45■□□□□ 0.22
USP11-207ENST00000478596 TBKBP1A7MCY6 615 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 JAK2O60674 1132 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 WEE2P0C1S8 567 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 LAG3P18627 525 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 HMGN5P82970 282 aaKnown RBP16.44■□□□□ 0.22
USP11-207ENST00000478596 IER5Q5VY09 327 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 CYFIP1Q7L576 1253 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 SAMD3Q8N6K7 520 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 NSUN7Q8NE18 718 aaKnown RBP16.44■□□□□ 0.22
USP11-207ENST00000478596 WASF1Q92558 559 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 ACSF2Q96CM8 615 aaPredicted RBP16.44■□□□□ 0.22
USP11-207ENST00000478596 LLPHQ9BRT6 129 aaKnown RBP16.44■□□□□ 0.22
USP11-207ENST00000478596 RTKNQ9BST9 563 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 RNF26Q9BY78 433 aaPredicted RBP16.44■□□□□ 0.22
USP11-207ENST00000478596 TMX1Q9H3N1 280 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 JMJD4Q9H9V9 463 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 FAM217BQ9NTX9 383 aaPredicted RBP16.44■□□□□ 0.22
USP11-207ENST00000478596 ORC3Q9UBD5 711 aaPredicted RBP16.44■□□□□ 0.22
USP11-207ENST00000478596 WNT16Q9UBV4 365 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 RALYQ9UKM9 306 aaKnown RBP16.44■□□□□ 0.22
USP11-207ENST00000478596 CDV3Q9UKY7 258 aaKnown RBP16.44■□□□□ 0.22
USP11-207ENST00000478596 STK36Q9NRP7 1315 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 IGSF9BQ9UPX0 1349 aa16.44■□□□□ 0.22
USP11-207ENST00000478596 SPATA31C2B4DYI2 1134 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 ZBTB5O15062 677 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 DTNBO60941 627 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 LMNB2Q03252 620 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 TRAF1Q13077 416 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 PPFIA1Q13136 1202 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 PAK2Q13177 524 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 TRIM29Q14134 588 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 ACAP1Q15027 740 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 GRIK4Q16099 956 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 GNPTABQ3T906 1256 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 MARCH8Q5T0T0 291 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 UTP14CQ5TAP6 766 aaKnown RBP16.43■□□□□ 0.22
USP11-207ENST00000478596 MRPL43Q8N983 215 aaKnown RBP16.43■□□□□ 0.22
USP11-207ENST00000478596 CHAMP1Q96JM3 812 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 CWH43Q9H720 699 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 KCNK12Q9HB15 430 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 DZANK1Q9NVP4 752 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 HCSTQ9UBK5 93 aa16.43■□□□□ 0.22
USP11-207ENST00000478596 V9GY48 417 aaPredicted RBP16.43■□□□□ 0.22
USP11-207ENST00000478596 PNMA6FA0A0J9YX94 578 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 CYTH3O43739 400 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 KINO60870 393 aaKnown RBP16.42■□□□□ 0.22
USP11-207ENST00000478596 DEXIO95424 95 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 XBP1P17861 261 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 SMARCA1P28370 1054 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 NAPAP54920 295 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 ST3GAL1Q11201 340 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 VARS2Q5ST30 1063 aaKnown RBP16.42■□□□□ 0.22
USP11-207ENST00000478596 RARS2Q5T160 578 aaKnown RBP16.42■□□□□ 0.22
USP11-207ENST00000478596 FAM102BQ5T8I3 360 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 XRRA1Q6P2D8 792 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 OTOP3Q7RTS5 596 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 TMC7Q7Z402 723 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 C1orf210Q8IVY1 113 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 INPP4AQ96PE3 977 aaPredicted RBP16.42■□□□□ 0.22
USP11-207ENST00000478596 AMNQ9BXJ7 453 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 RIOX1Q9H6W3 641 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 DLGAP2Q9P1A6 1054 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 TELO2Q9Y4R8 837 aa16.42■□□□□ 0.22
USP11-207ENST00000478596 DCDC2BA2VCK2 349 aa16.41■□□□□ 0.22
USP11-207ENST00000478596 KRBA1A5PL33 1030 aa16.41■□□□□ 0.22
USP11-207ENST00000478596 C2orf71A6NGG8 1288 aa16.41■□□□□ 0.22
USP11-207ENST00000478596 STK25O00506 426 aa16.41■□□□□ 0.22
USP11-207ENST00000478596 CLASP2O75122 1294 aaKnown RBP16.41■□□□□ 0.22
USP11-207ENST00000478596 STAM2O75886 525 aa16.41■□□□□ 0.22
USP11-207ENST00000478596 SMC1AQ14683 1233 aaKnown RBP16.41■□□□□ 0.22
USP11-207ENST00000478596 CCDC12Q8WUD4 166 aaPredicted RBP16.41■□□□□ 0.22
USP11-207ENST00000478596 ZFP91Q96JP5 570 aaPredicted RBP16.41■□□□□ 0.22
USP11-207ENST00000478596 IGSF9Q9P2J2 1179 aa16.41■□□□□ 0.22
USP11-207ENST00000478596 NCDNQ9UBB6 729 aa16.41■□□□□ 0.22
USP11-207ENST00000478596 TRPV2Q9Y5S1 764 aa16.41■□□□□ 0.22
USP11-207ENST00000478596 hCG_1984214I3L0E3 225 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 M0QZ92 97 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 PRPF3O43395 683 aaKnown RBP16.4■□□□□ 0.22
USP11-207ENST00000478596 CTDNEP1O95476 244 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 GJB2P29033 226 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 HOXA13P31271 388 aaPredicted RBP16.4■□□□□ 0.22
USP11-207ENST00000478596 PPM1AP35813 382 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 KRT17Q04695 432 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 SEMA3FQ13275 785 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 CUL4AQ13619 759 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 NTRK3Q16288 839 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 C12orf76Q8N812 135 aaPredicted RBP16.4■□□□□ 0.22
USP11-207ENST00000478596 ZNF713Q8N859 430 aaPredicted RBP16.4■□□□□ 0.22
USP11-207ENST00000478596 CCDC148Q8NFR7 591 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 SENP7Q9BQF6 1050 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 C1orf112Q9NSG2 853 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms