RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 LRRC55Q6ZSA7 311 aa11.48□□□□□ -0.57
LCLAT1-209ENST00000478015 TMEM143Q96AN5 459 aa11.48□□□□□ -0.57
LCLAT1-209ENST00000478015 FDXACB1Q9BRP7 624 aaPredicted RBP11.48□□□□□ -0.57
LCLAT1-209ENST00000478015 TTC12Q9H892 705 aaPredicted RBP11.48□□□□□ -0.57
LCLAT1-209ENST00000478015 MINDY3Q9H8M7 445 aa11.48□□□□□ -0.57
LCLAT1-209ENST00000478015 IFT122Q9HBG6 1241 aa11.48□□□□□ -0.57
LCLAT1-209ENST00000478015 CYP26B1Q9NR63 512 aa11.48□□□□□ -0.57
LCLAT1-209ENST00000478015 THEGQ9P2T0 379 aa11.48□□□□□ -0.57
LCLAT1-209ENST00000478015 CEP131Q9UPN4 1083 aa11.48□□□□□ -0.57
LCLAT1-209ENST00000478015 SPATA31C1P0DKV0 1188 aa11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 ATF7P17544 494 aaPredicted RBP11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 MCM7P33993 719 aa11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 BMPR1AP36894 532 aa11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 TXKP42681 527 aa11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 FAM189BP81408 668 aa11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 BTG3Q14201 252 aaPredicted RBP11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 SKIV2LQ15477 1246 aaKnown RBP11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 FIBCD1Q8N539 461 aa11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 EIF2AK1Q9BQI3 630 aaKnown RBP11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 FTHL17Q9BXU8 183 aa11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 DHX33Q9H6R0 707 aaKnown RBP11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 XPNPEP1Q9NQW7 623 aa11.47□□□□□ -0.57
LCLAT1-209ENST00000478015 C5orf67F2Z3F1 127 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 RPLP2P05387 115 aaKnown RBP11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 P4HBP07237 508 aaKnown RBP11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 YWHABP31946 246 aaKnown RBP11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 CTNNB1P35222 781 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 SARSP49591 514 aaKnown RBP11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 GPM6BQ13491 265 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 EPHA7Q15375 998 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 ZNF174Q15697 407 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 CALCRLQ16602 461 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 SLC24A5Q71RS6 500 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 RHPN2Q8IUC4 686 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 NPAS4Q8IUM7 802 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 TPH2Q8IWU9 490 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 C4orf32Q8N8J7 132 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 TMX3Q96JJ7 454 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 C8orf76Q96K31 380 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 LLPHQ9BRT6 129 aaKnown RBP11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 PCDHA12Q9UN75 941 aa11.46□□□□□ -0.57
LCLAT1-209ENST00000478015 GPR182O15218 404 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 NEMFO60524 1076 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 ITGB1P05556 798 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 IRS1P35568 1242 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 PBX3P40426 434 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 ECM1Q16610 540 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 LONRF3Q496Y0 759 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 TJAP1Q5JTD0 557 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 C4orf19Q8IY42 314 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 PIGOQ8TEQ8 1089 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 ATXN2LQ8WWM7 1075 aaKnown RBP11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 PRPF31Q8WWY3 499 aaKnown RBP11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 MRPL38Q96DV4 380 aaKnown RBP11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 CEP170P1Q96L14 293 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 TBC1D32Q96NH3 1257 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 SUCLA2Q9P2R7 463 aaPredicted RBP11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 PLAGL2Q9UPG8 496 aa11.46□□□□□ -0.58
LCLAT1-209ENST00000478015 DENND3A2RUS2 1198 aa11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 AFF1P51825 1210 aaKnown RBP11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 DLX2Q07687 328 aaPredicted RBP11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 IL17AQ16552 155 aa11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 TCEAL5Q5H9L2 206 aa11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 CLLU1OSQ5K130 101 aa11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 ZNF598Q86UK7 904 aaKnown RBP11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 KLHL23Q8NBE8 558 aa11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 NLRP7Q8WX94 980 aa11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 NLRP4Q96MN2 994 aa11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 CASD1Q96PB1 797 aa11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 MAP7D2Q96T17 732 aa11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 TYW1Q9NV66 732 aaKnown RBP11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 LMCD1Q9NZU5 365 aa11.45□□□□□ -0.58
LCLAT1-209ENST00000478015 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 B4GALT3O60512 393 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 MED24O75448 989 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 U2AF2P26368 475 aaKnown RBP eCLIP11.44□□□□□ -0.585e-13■■■□□ 18.9
LCLAT1-209ENST00000478015 TMOD1P28289 359 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 LTBRP36941 435 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 MRPS5P82675 430 aaKnown RBP11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 RABEP1Q15276 862 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 CATSPER3Q86XQ3 398 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 NOSTRINQ8IVI9 506 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 SLFN12Q8IYM2 578 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 CMTR2Q8IYT2 770 aaKnown RBP11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 SPPL3Q8TCT6 385 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 LPPQ93052 612 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 ZSCAN31Q96LW9 406 aaPredicted RBP11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 CWH43Q9H720 699 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 POLD4Q9HCU8 107 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 BRMS1Q9HCU9 246 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 CD320Q9NPF0 282 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 SH2B1Q9NRF2 756 aaPredicted RBP11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 PCDHB6Q9Y5E3 794 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 TBKBP1A7MCY6 615 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 HOXA11P31270 313 aaPredicted RBP11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 TECP42680 631 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 RBM10P98175 930 aaKnown RBP11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 TRIM29Q14134 588 aa11.44□□□□□ -0.58
LCLAT1-209ENST00000478015 ADGRD2Q7Z7M1 963 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms