RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 PPP1R11O60927 126 aaPredicted RBP10.59□□□□□ -0.71
CMC1-209ENST00000477739 IFNB1P01574 187 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 SHBGP04278 402 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 NPR1P16066 1061 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 SESN3P58005 492 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 ARHGAP4P98171 946 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 MEA1Q16626 185 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 LLGL2Q6P1M3 1020 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 SLC20A1Q8WUM9 679 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 KAT5Q92993 513 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 C18orf8Q96DM3 657 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 DYDC2Q96IM9 177 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 CCDC17Q96LX7 622 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 FMO2Q99518 471 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 PSD3Q9NYI0 1048 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 TMOD2Q9NZR1 351 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 CEP72Q9P209 647 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 FRMD4BQ9Y2L6 1034 aa10.59□□□□□ -0.71
CMC1-209ENST00000477739 PVALEFA0A1B0GWK0 134 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 CYP11B2P19099 503 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 SMARCA1P28370 1054 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 SHMT1P34896 483 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 LRRC63Q05C16 580 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 UBAP2Q5T6F2 1119 aaKnown RBP10.58□□□□□ -0.72
CMC1-209ENST00000477739 DENND2CQ68D51 928 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 LRRC55Q6ZSA7 311 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 CCDC26Q8TAB7 109 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 MYCBPAPQ8TBZ2 947 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 ATG4AQ8WYN0 398 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 THAP2Q9H0W7 228 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 GAS7O60861 476 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 CAND2O75155 1236 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 SOX10P56693 466 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 LONRF1Q17RB8 773 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 N4BP2L2Q92802 583 aaPredicted RBP10.58□□□□□ -0.72
CMC1-209ENST00000477739 HAS1Q92839 578 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 ACSF2Q96CM8 615 aaPredicted RBP10.58□□□□□ -0.72
CMC1-209ENST00000477739 TTYH3Q9C0H2 523 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 TAF1DQ9H5J8 278 aaPredicted RBP10.58□□□□□ -0.72
CMC1-209ENST00000477739 PI4KBQ9UBF8 816 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 PDE4DIPQ5VU43 2346 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 BCORQ6W2J9 1755 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 MDH1P40925 334 aaKnown RBP10.58□□□□□ -0.72
CMC1-209ENST00000477739 FXR2P51116 673 aaKnown RBP eCLIP10.58□□□□□ -0.72
CMC1-209ENST00000477739 TUBB4BP68371 445 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 ABCB5Q2M3G0 1257 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 SLC27A3Q5K4L6 730 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 USP38Q8NB14 1042 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 SLC35G2Q8TBE7 412 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 EPS8L3Q8TE67 593 aaKnown RBP10.58□□□□□ -0.72
CMC1-209ENST00000477739 FBXO28Q9NVF7 368 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 PPP1R9AQ9ULJ8 1098 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 DAAM1Q9Y4D1 1078 aa10.58□□□□□ -0.72
CMC1-209ENST00000477739 SNED1Q8TER0 1413 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 A0A1W2PRG0 241 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 H0Y3Z8 333 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 GOLGA8SH3BPF8 625 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 GOLGA8MH3BSY2 632 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 MMEP08473 750 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 HOXA10P31260 410 aaPredicted RBP10.57□□□□□ -0.72
CMC1-209ENST00000477739 CLNS1AP54105 237 aaKnown RBP10.57□□□□□ -0.72
CMC1-209ENST00000477739 IFI35P80217 286 aaPredicted RBP10.57□□□□□ -0.72
CMC1-209ENST00000477739 PDIA5Q14554 519 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 TMEM132AQ24JP5 1023 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 LRCH2Q5VUJ6 765 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 FBXO11Q86XK2 927 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 MTMR9Q96QG7 549 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 PRMT1Q99873 361 aaKnown RBP10.57□□□□□ -0.72
CMC1-209ENST00000477739 PI4K2AQ9BTU6 479 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 DHX36Q9H2U1 1008 aaKnown RBP10.57□□□□□ -0.72
CMC1-209ENST00000477739 ALG13Q9NP73 1137 aaKnown RBP10.57□□□□□ -0.72
CMC1-209ENST00000477739 NAGPAQ9UK23 515 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 TARSL2A2RTX5 802 aaKnown RBP10.57□□□□□ -0.72
CMC1-209ENST00000477739 ARHGEF35A5YM69 484 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 H0YIN7 160 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 ECE1P42892 770 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 DR1Q01658 176 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 ZNF394Q53GI3 561 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 RFX8Q6ZV50 586 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 LRRC45Q96CN5 670 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 CYFIP2Q96F07 1278 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 FAM167BQ9BTA0 163 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 AMNQ9BXJ7 453 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 GPRC5CQ9NQ84 441 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 SPATA31A6Q5VVP1 1343 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 KDM3AQ9Y4C1 1321 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 F5H6K3 240 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 MEFVO15553 781 aaPredicted RBP10.57□□□□□ -0.72
CMC1-209ENST00000477739 GCFC2P16383 781 aaKnown RBP10.57□□□□□ -0.72
CMC1-209ENST00000477739 KLRC3Q07444 240 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 GKAP1Q5VSY0 366 aaPredicted RBP10.57□□□□□ -0.72
CMC1-209ENST00000477739 MMGT1Q8N4V1 131 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 FBXO25Q8TCJ0 367 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 ARHGEF26Q96DR7 871 aa10.57□□□□□ -0.72
CMC1-209ENST00000477739 INTS9Q9NV88 658 aaKnown RBP10.57□□□□□ -0.72
CMC1-209ENST00000477739 DDTLA6NHG4 134 aaPredicted RBP10.56□□□□□ -0.72
CMC1-209ENST00000477739 POC1B-GALNT4F8VUJ3 575 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 RAD17O75943 681 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 NOL4O94818 638 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 POLD1P28340 1107 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms