RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 TOM1L2Q6ZVM7 507 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 SIRT2Q8IXJ6 389 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 TEX9Q8N6V9 391 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 DTWD2Q8NBA8 298 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 CCDC148Q8NFR7 591 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 PPP1R13LQ8WUF5 828 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 RAPGEF4Q8WZA2 1011 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 PPP1R14BQ96C90 147 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 TMEM87BQ96K49 555 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 SIGLEC10Q96LC7 697 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 MMTAG2Q9BU76 263 aaKnown RBP5.26□□□□□ -1.57
PTCD3-212ENST00000477520 UPF3BQ9BZI7 483 aaKnown RBP5.26□□□□□ -1.57
PTCD3-212ENST00000477520 ADAM7Q9H2U9 754 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 FAM204AQ9H8W3 233 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 GPATCH2Q9NW75 528 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 TRPC5Q9UL62 973 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-212ENST00000477520 CORO1CQ9ULV4 474 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-212ENST00000477520 THRAP3Q9Y2W1 955 aaKnown RBP5.26□□□□□ -1.57
PTCD3-212ENST00000477520 IRAK3Q9Y616 596 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 CAPN7Q9Y6W3 813 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 FAM208AQ9UK61 1670 aaKnown RBP5.26□□□□□ -1.57
PTCD3-212ENST00000477520 SLIT2O94813 1529 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 COL18A1P39060 1754 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 RGPD5Q99666 1765 aa5.26□□□□□ -1.57
PTCD3-212ENST00000477520 AFF2P51816 1311 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 CAMTA1Q9Y6Y1 1673 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 CRB1P82279 1406 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 CTAGE15A4D2H0 777 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 ENO4A6NNW6 628 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 EIF3HO15372 352 aaKnown RBP eCLIP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 TREHO43280 583 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 LRRN2O75325 713 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 RASSF9O75901 435 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 PRPF6O94906 941 aaKnown RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 GNAI3P08754 354 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 CTAGE8P0CG41 777 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 EPB41P11171 864 aaKnown RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 YY1P25490 414 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 GBP2P32456 591 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 IL13P35225 146 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 PEX19P40855 299 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 GCLCP48506 637 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 GNG11P61952 73 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 SRSF3P84103 164 aaKnown RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 ROR2Q01974 943 aaKnown RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 ACTN3Q08043 901 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 DYNC1I2Q13409 638 aaKnown RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 RIPK1Q13546 671 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 SNX17Q15036 470 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 ZRSR2Q15696 482 aaKnown RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 VPS72Q15906 364 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 CCDC96Q2M329 555 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 CCDC40Q4G0X9 1142 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 ALS2CLQ60I27 953 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 LARP1BQ659C4 914 aaKnown RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 TLDC1Q6P9B6 456 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 CTAGE6Q86UF2 777 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 CTAGE4Q8IX94 777 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 ARFGAP2Q8N6H7 521 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 GBP7Q8N8V2 638 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 TRIM58Q8NG06 486 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 BCAS4Q8TDM0 211 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 MICAL1Q8TDZ2 1067 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 DHX38Q92620 1227 aaKnown RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 KAT2BQ92831 832 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 ZNF396Q96N95 335 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 PLEKHF1Q96S99 279 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 TSPAN18Q96SJ8 248 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 CAPS2Q9BXY5 557 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 LRRCC1Q9C099 1032 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 IQCGQ9H095 443 aaKnown RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 VCPKMTQ9H867 229 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 RGL1Q9NZL6 768 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 USTQ9Y2C2 406 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 NUB1Q9Y5A7 615 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 LRP6O75581 1613 aa5.25□□□□□ -1.57
PTCD3-212ENST00000477520 COL5A2P05997 1499 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-212ENST00000477520 PLCH1Q4KWH8 1693 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 LMO7Q8WWI1 1683 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 IGSF1Q8N6C5 1336 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 CDHR2Q9BYE9 1310 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 KAT6BQ8WYB5 2073 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.24□□□□□ -1.57
PTCD3-212ENST00000477520 PEAK1Q9H792 1746 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 GOLGA6CA6NDK9 693 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 KIF5CO60282 957 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 VAMP4O75379 141 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 PGRP06401 933 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 CCDC175P0C221 793 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 GOLGA6DP0CG33 693 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 GHRP10912 638 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 IL2RBP14784 551 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 PAX7P23759 505 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 GJB2P29033 226 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 ABCD1P33897 745 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 INHBEP58166 350 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 PLCB3Q01970 1234 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 TEKQ02763 1124 aa5.24□□□□□ -1.57
PTCD3-212ENST00000477520 CKAP4Q07065 602 aaKnown RBP5.24□□□□□ -1.57
PTCD3-212ENST00000477520 STIM1Q13586 685 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms