RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ATP8B4Q8TF62 1192 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 GPKOWQ92917 476 aaPredicted RBP eCLIP16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 ZFATQ9P243 1243 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 ADAMTS1Q9UHI8 967 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 RASAL2Q9UJF2 1139 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 ATP8A1Q9Y2Q0 1164 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 MYMKA6NI61 221 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 STXBP3O00186 592 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 UBOX5O94941 541 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 VIMP08670 466 aaKnown RBP16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 DRG2P55039 364 aaKnown RBP16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 BNIP1Q12981 228 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 TRAF1Q13077 416 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 MFN1Q8IWA4 741 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 RTKN2Q8IZC4 609 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 RAB3IPQ96QF0 476 aaPredicted RBP16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 DBNDD1Q9H9R9 158 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 ARHGEF3Q9NR81 526 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 ABCF3Q9NUQ8 709 aa16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 PPP1R1BQ9UD71 204 aaPredicted RBP16.53■□□□□ 0.24
CLSTN1-205ENST00000477264 IGF2BP3O00425 579 aaKnown RBP eCLIP16.52■□□□□ 0.244e-7■□□□□ 10.3
CLSTN1-205ENST00000477264 FERP16591 822 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 DIXDC1Q155Q3 683 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 GRIK5Q16478 980 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 ANKRD20A2Q5SQ80 823 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 ANKRD20A1Q5TYW2 823 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 ANKRD20A3Q5VUR7 823 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 VPS36Q86VN1 386 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 TRIM59Q8IWR1 403 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 FAM133AQ8N9E0 248 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 KLHL29Q96CT2 875 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 CDK5RAP3Q96JB5 506 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 MMTAG2Q9BU76 263 aaKnown RBP16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 PIM2Q9P1W9 311 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 CTNNAL1Q9UBT7 734 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 PARP2Q9UGN5 583 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 AGAP1Q9UPQ3 857 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 SUGT1Q9Y2Z0 365 aa16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.52■□□□□ 0.24
CLSTN1-205ENST00000477264 VEGFAP15692 232 aaPredicted RBP16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 KCNA3P22001 575 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 PEX19P40855 299 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 PRKCIP41743 596 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 GRB10Q13322 594 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 DUPD1Q68J44 220 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 NEK8Q86SG6 692 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 LZTS2Q9BRK4 669 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 RAB34Q9BZG1 259 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 TRIM7Q9C029 511 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 ATP8A2Q9NTI2 1148 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 ZDHHC18Q9NUE0 388 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 BLOC1S4Q9NUP1 217 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 ARPP21Q9UBL0 812 aaPredicted RBP16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 NENFQ9UMX5 172 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 GFPT2O94808 682 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 EPS15P42566 896 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 KCNJ2P63252 427 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 PDCD2Q16342 344 aaPredicted RBP16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 TMEM266Q2M3C6 531 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 SOGA3Q5TF21 947 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 DGKHQ86XP1 1220 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 GPIHBP1Q8IV16 184 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 HPS3Q969F9 1004 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 HES6Q96HZ4 224 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 DPH5Q9H2P9 285 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 EPB41L4BQ9H329 900 aa16.51■□□□□ 0.23
CLSTN1-205ENST00000477264 EME2A4GXA9 379 aaPredicted RBP16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 MSH2P43246 934 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 FXR2P51116 673 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 MKRN3Q13064 507 aaKnown RBP16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 AOC3Q16853 763 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 TNFAIP8L3Q5GJ75 292 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 MFSD5Q6N075 450 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 ZC3H3Q8IXZ2 948 aaKnown RBP16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 RAD54LQ92698 747 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 PRMT1Q99873 361 aaKnown RBP16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 ERP44Q9BS26 406 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 NAGPAQ9UK23 515 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 CYP2D7A0A087X1C5 515 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 ECE2O60344 883 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 CCNT1O60563 726 aaKnown RBP16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 GJB6O95452 261 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 SSR1P43307 286 aaKnown RBP16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 MRPS35P82673 323 aaKnown RBP16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 SBK1Q52WX2 424 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 PPP4R3CPQ6ZMV5 832 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 OSBPL1AQ9BXW6 950 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 AZI2Q9H6S1 392 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 AMFRQ9UKV5 643 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 ARL2BPQ9Y2Y0 163 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 DAAM1Q9Y4D1 1078 aa16.5■□□□□ 0.23
CLSTN1-205ENST00000477264 TSPY2A6NKD2 308 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 TRAF5O00463 557 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 H2AFZP0C0S5 128 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 ITGA4P13612 1032 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 HSPA6P17066 643 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 PPP4CP60510 307 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 DR1Q01658 176 aa16.49■□□□□ 0.23
CLSTN1-205ENST00000477264 CCDC15Q0P6D6 951 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms